Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a3E9PWQ3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Rn7s1-201ENSMUST00000174924 300 ntBASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Rn7s2-201ENSMUST00000175032 300 ntBASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Gm26461-201ENSMUST00000175064 290 ntBASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a3E9PWQ3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Gm8515-201ENSMUST00000194852 576 ntBASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a3E9PWQ3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms