Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.36■□□□□ 0.21
Rrn3B2RS91 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrn3B2RS91 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.35■□□□□ 0.21
Rrn3B2RS91 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.35■□□□□ 0.21
Rrn3B2RS91 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.35■□□□□ 0.21
Rrn3B2RS91 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.35■□□□□ 0.21
Rrn3B2RS91 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rrn3B2RS91 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.34■□□□□ 0.21
Rrn3B2RS91 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrn3B2RS91 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rrn3B2RS91 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Rrn3B2RS91 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Rrn3B2RS91 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rrn3B2RS91 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rrn3B2RS91 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Rrn3B2RS91 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrn3B2RS91 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Rrn3B2RS91 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrn3B2RS91 Gm27742-201ENSMUST00000184667 60 ntBASIC16.33■□□□□ 0.2
Rrn3B2RS91 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.33■□□□□ 0.2
Rrn3B2RS91 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rrn3B2RS91 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrn3B2RS91 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.33■□□□□ 0.2
Rrn3B2RS91 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rrn3B2RS91 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrn3B2RS91 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Rrn3B2RS91 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrn3B2RS91 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Gm10052-201ENSMUST00000168019 960 ntBASIC16.32■□□□□ 0.2
Rrn3B2RS91 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Gm7729-201ENSMUST00000050143 801 ntBASIC16.32■□□□□ 0.2
Rrn3B2RS91 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.32■□□□□ 0.2
Rrn3B2RS91 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rrn3B2RS91 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms