Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Asic1-205ENSMUST00000228185 1818 ntBASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-1A0N8R0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav12d-1A0N8R0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav12d-1A0N8R0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-1A0N8R0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Phf7-203ENSMUST00000226565 1971 ntBASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Mir1199-201ENSMUST00000117015 119 ntBASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Gm36967-201ENSMUST00000193814 266 ntBASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Odf3b-204ENSMUST00000227834 930 ntBASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-1A0N8R0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms