Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lcmt1A0A0U1RNF2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lcmt1A0A0U1RNF2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.09■□□□□ 0.49
Lcmt1A0A0U1RNF2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lcmt1A0A0U1RNF2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lcmt1A0A0U1RNF2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lcmt1A0A0U1RNF2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lcmt1A0A0U1RNF2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lcmt1A0A0U1RNF2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Lcmt1A0A0U1RNF2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 Gm9987-201ENSMUST00000069768 567 ntBASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Lcmt1A0A0U1RNF2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Gm11355-201ENSMUST00000121120 306 ntBASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Gm18421-201ENSMUST00000204122 625 ntBASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lcmt1A0A0U1RNF2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lcmt1A0A0U1RNF2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lcmt1A0A0U1RNF2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lcmt1A0A0U1RNF2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms