Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm12933-201ENSMUST00000120203 872 ntBASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm26524-201ENSMUST00000192339 390 ntBASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm5408-201ENSMUST00000197998 747 ntBASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm10138-203ENSMUST00000206952 366 ntBASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
Trav9d-4A0A0G2JG37 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms