Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trav7-5A0A0G2JFX6 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav7-5A0A0G2JFX6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7-5A0A0G2JFX6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7-5A0A0G2JFX6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms