Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm13401-201ENSMUST00000117074 291 ntBASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm12933-201ENSMUST00000120203 872 ntBASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.33□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms