Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav9n-2A0A0G2JDP3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Gm11336-201ENSMUST00000118168 334 ntBASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Gm6433-201ENSMUST00000118634 875 ntBASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Gm26039-201ENSMUST00000158152 144 ntBASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Mir1668-201ENSMUST00000184114 107 ntBASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm22697-201ENSMUST00000175194 63 ntBASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm27389-201ENSMUST00000183622 195 ntBASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm44450-201ENSMUST00000199528 114 ntBASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm18421-201ENSMUST00000204122 625 ntBASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms