Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-4A0A0B4J1K2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9-4A0A0B4J1K2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9-4A0A0B4J1K2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9-4A0A0B4J1K2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9-4A0A0B4J1K2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.21□□□□□ -0.46
Trav9-4A0A0B4J1K2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav9-4A0A0B4J1K2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9-4A0A0B4J1K2 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.21□□□□□ -0.46
Trav9-4A0A0B4J1K2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav9-4A0A0B4J1K2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Trav9-4A0A0B4J1K2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms