Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm4535-201ENSMUST00000182274 558 ntBASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm8655-201ENSMUST00000221159 852 ntBASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm10355-201ENSMUST00000097146 517 ntBASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.51■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm13418-201ENSMUST00000119097 944 ntBASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm11780-201ENSMUST00000136880 516 ntBASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm25990-201ENSMUST00000102440 86 ntBASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms