Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trbc1A0A0A6YWV4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm14859-201ENSMUST00000117752 357 ntBASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm45328-201ENSMUST00000210942 917 ntBASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbc1A0A0A6YWV4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms