Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav21-dv12A0A075B6C4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm11539-201ENSMUST00000119837 557 ntBASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm7370-201ENSMUST00000219471 767 ntBASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav21-dv12A0A075B6C4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm16061-201ENSMUST00000122167 857 ntBASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm13474-201ENSMUST00000122466 815 ntBASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav21-dv12A0A075B6C4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm13436-201ENSMUST00000120418 567 ntBASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms