Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm10013-201ENSMUST00000106074 672 ntBASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm7638-201ENSMUST00000121348 967 ntBASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm13474-201ENSMUST00000122466 815 ntBASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-7A0A075B6B0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-7A0A075B6B0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-7A0A075B6B0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.58□□□□□ -0.39
Trav6d-7A0A075B6B0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-7A0A075B6B0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-7A0A075B6B0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-7A0A075B6B0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-7A0A075B6B0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm16061-201ENSMUST00000122167 857 ntBASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm18101-201ENSMUST00000215769 548 ntBASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms