Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm6420-201ENSMUST00000193885 723 ntBASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm42778-201ENSMUST00000199644 553 ntBASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-3A0A075B6A4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm2399-201ENSMUST00000104944 225 ntBASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Nespas-201ENSMUST00000143738 1083 ntBASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-3A0A075B6A4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm45102-201ENSMUST00000207427 857 ntBASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav12d-3A0A075B6A4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms