Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.33□□□□□ -0.28
Trav18A0A075B656 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Gm18115-201ENSMUST00000221209 621 ntBASIC13.33□□□□□ -0.28
Trav18A0A075B656 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.32□□□□□ -0.28
Trav18A0A075B656 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav18A0A075B656 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav18A0A075B656 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.31□□□□□ -0.28
Trav18A0A075B656 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Gm44450-201ENSMUST00000199528 114 ntBASIC13.31□□□□□ -0.28
Trav18A0A075B656 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav18A0A075B656 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.3□□□□□ -0.28
Trav18A0A075B656 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms