Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Gm37055-201ENSMUST00000191866 133 ntBASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-4A0A075B652 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Gm2274-201ENSMUST00000184539 609 ntBASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-4A0A075B652 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav5-4A0A075B652 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav5-4A0A075B652 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav5-4A0A075B652 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.58□□□□□ -0.23
Trav5-4A0A075B652 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav5-4A0A075B652 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Trav5-4A0A075B652 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Gm13186-201ENSMUST00000118031 316 ntBASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms