Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Gm27741-201ENSMUST00000185060 237 ntBASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Gm45328-201ENSMUST00000210942 917 ntBASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Gm13186-201ENSMUST00000118031 316 ntBASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Phf7-203ENSMUST00000226565 1971 ntBASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav13d-1A0A075B606 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Mir3081-201ENSMUST00000175305 84 ntBASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Gm18669-201ENSMUST00000216049 778 ntBASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav13d-1A0A075B606 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms