Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Mir770-201ENSMUST00000103252 94 ntBASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Gm9013-201ENSMUST00000132939 882 ntBASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv4A0A075B5I2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv4A0A075B5I2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Gm10052-201ENSMUST00000168019 960 ntBASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Gm44430-201ENSMUST00000203376 995 ntBASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Gm7729-201ENSMUST00000050143 801 ntBASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv4A0A075B5I2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms