Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 ELF2P3-201ENST00000445099 1506 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 FTLP6-201ENST00000355274 422 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 Y_RNA.255-201ENST00000364581 97 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 Y_RNA.402-201ENST00000383972 102 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-328P-201ENST00000390887 106 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 SNORA57.3-201ENST00000411095 141 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 AL160275.3-201ENST00000423876 471 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 UBE2V1P8-201ENST00000437166 265 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 AC016691.1-201ENST00000441321 413 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 AC104058.1-201ENST00000448028 297 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 AL162395.1-201ENST00000457882 422 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 RPL7L1P8-201ENST00000469911 741 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 RPL21P129-201ENST00000491732 478 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 PCBP2P3-201ENST00000509726 843 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-1281P-201ENST00000516223 105 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-928P-201ENST00000516876 104 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 SCARNA14-201ENST00000516903 136 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-1315P-201ENST00000517187 99 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 AC109635.3-201ENST00000529536 185 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 AC103843.2-201ENST00000530523 682 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 AL163153.1-201ENST00000554223 283 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 MIR486-1-201ENST00000612171 68 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 AC005344.1-201ENST00000613391 459 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
COL4A3BPQ9Y5P4 AC004972.1-201ENST00000623934 2209 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AC006020.1-201ENST00000420179 1854 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AP004289.2-201ENST00000444413 1457 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AL359837.1-201ENST00000381357 287 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 Y_RNA.554-201ENST00000384672 102 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 Y_RNA.573-201ENST00000384763 105 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 USP9YP27-201ENST00000418455 438 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 RPL7P46-201ENST00000425129 740 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AC017083.1-201ENST00000428093 483 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 MTATP6P13-201ENST00000438531 667 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AC092798.1-201ENST00000458542 409 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 HMGN2P13-201ENST00000476476 274 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 RNA5SP164-201ENST00000516533 110 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 SNORA67.7-201ENST00000516664 135 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AC090877.1-201ENST00000561418 344 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 MTATP6P3-201ENST00000581686 676 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 MIR3158-1-201ENST00000583596 81 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AL162413.1-201ENST00000603198 110 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AL355598.1-201ENST00000604169 202 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AC006133.1-201ENST00000617106 264 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 AC039056.2-201ENST00000622261 511 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 MIR1321-201ENST00000637766 79 ntBASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL4A3BPQ9Y5P4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AL139276.1-201ENST00000311910 1001 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 SNORA62.3-201ENST00000365110 153 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 Y_RNA.450-201ENST00000384198 113 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU6-550P-201ENST00000391057 101 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 MIR888-201ENST00000401186 77 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 HLFP1-201ENST00000402375 499 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 RPL21P109-201ENST00000422213 475 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AC018644.1-201ENST00000429934 551 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 SEPT14P3-201ENST00000439401 183 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AL732372.2-207ENST00000445840 183 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 SEPT14P2-201ENST00000453405 183 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 BTF3L4P4-201ENST00000506381 449 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 SEPT14P4-201ENST00000513445 186 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU6-711P-201ENST00000517255 106 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 FO082796.1-201ENST00000523795 183 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 AP003122.3-201ENST00000526316 255 ntBASIC4.26□□□□□ -1.73
COL4A3BPQ9Y5P4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms