Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 PSMA3P-201ENST00000555485 635 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AL355812.1-201ENST00000603215 216 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AL133255.1-201ENST00000606374 441 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 ZNF734P-201ENST00000419494 1534 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 HSPE1P11-201ENST00000339579 310 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 SNORA62.1-201ENST00000364287 154 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 RNU6-641P-201ENST00000384006 107 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 U1.1-201ENST00000384101 164 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AL035423.1-201ENST00000420331 213 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AL645937.1-202ENST00000421799 937 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 MTATP6P16-201ENST00000434543 526 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC236972.2-201ENST00000434979 310 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 HMGB1P18-201ENST00000438801 619 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC083863.1-201ENST00000438811 231 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC006480.1-201ENST00000449887 378 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 PPP1R2P5-201ENST00000457256 603 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 RPS29P15-201ENST00000458329 171 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 RNU7-182P-201ENST00000459009 62 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 RNU7-59P-201ENST00000459101 61 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 RNU6-329P-201ENST00000459618 107 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC126389.1-201ENST00000477436 290 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 RNU2-10P-201ENST00000516375 211 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 RNU7-51P-201ENST00000516560 62 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 RN7SKP256-201ENST00000517201 314 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AP000857.1-201ENST00000532151 543 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 OR5B10P-201ENST00000532869 642 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 RNU6-89P-201ENST00000606519 100 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AL391261.4-201ENST00000616012 481 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AL603758.1-201ENST00000618654 241 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC002550.2-201ENST00000621246 394 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC103858.2-201ENST00000621471 543 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AP001350.1-201ENST00000601906 1524 ntBASIC4.44□□□□□ -1.7
CTDP1Q9Y5B0 AC027287.1-201ENST00000553115 1453 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 MAPK10-373ENST00000641983 6772 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 SNORA5A-201ENST00000384111 134 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 U8.11-201ENST00000384699 133 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 U8.12-201ENST00000384701 133 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 U3.29-201ENST00000391296 212 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 PTMAP5-201ENST00000393073 333 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 ELOCP18-201ENST00000434209 337 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AC024082.2-201ENST00000434771 238 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 MTND1P9-201ENST00000453775 944 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 U8.18-201ENST00000459285 133 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 RPL21P99-201ENST00000480369 423 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AC116562.3-201ENST00000506136 177 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AC005798.1-201ENST00000513715 387 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 HMGB1P41-201ENST00000520234 440 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AC068587.5-201ENST00000528506 175 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AC103843.2-201ENST00000530523 682 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AP003385.6-201ENST00000531603 374 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 NCAPGP2-201ENST00000557911 754 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AC113139.1-201ENST00000605049 239 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AL365204.3-201ENST00000612448 685 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms