Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 MTCO2P11-201ENST00000431069 680 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 OR4K11P-201ENST00000431829 904 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 snoU13.4-201ENST00000458916 104 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 RPL21P104-201ENST00000464143 478 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AC007182.2-201ENST00000489251 402 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AC046134.1-201ENST00000514454 666 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 Y_RNA.693-201ENST00000516641 110 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 MTND1P35-201ENST00000526739 508 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 DEFB108D-201ENST00000527787 222 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AL512360.1-201ENST00000555346 234 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AC025678.1-201ENST00000567861 338 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 FGF7P1-201ENST00000582820 288 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 BNIP3P9-201ENST00000603714 553 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AL391646.1-201ENST00000603860 190 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AL022099.1-201ENST00000604551 712 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AL020991.1-201ENST00000612314 373 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AC007998.5-201ENST00000622938 237 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AL354685.2-201ENST00000448218 1447 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 RNU6-1085P-201ENST00000363576 107 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 RNA5SP42-201ENST00000364278 115 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 RNU6-483P-201ENST00000384088 108 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AL109755.1-201ENST00000401791 649 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 Z98941.1-201ENST00000407764 100 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 MTND3P17-201ENST00000416968 344 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AL353678.1-201ENST00000422735 741 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC012498.1-201ENST00000424037 437 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC133104.1-201ENST00000429100 218 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 RPL23AP69-201ENST00000431134 458 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC090774.1-201ENST00000435925 246 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 TIMM9P1-201ENST00000436122 256 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 USP9YP8-201ENST00000441913 500 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 TPT1P14-201ENST00000448018 505 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC132479.1-201ENST00000449160 144 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 RPS3AP50-201ENST00000487064 803 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 RNU6-798P-201ENST00000516912 103 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 RNU6-1073P-201ENST00000517182 106 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC099489.2-201ENST00000574976 260 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 FAM60BP-201ENST00000578364 658 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 MIR3118-1-201ENST00000581787 76 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC012443.1-201ENST00000605605 231 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AL161734.1-201ENST00000609720 557 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC012531.5-201ENST00000611375 151 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AL355810.1-201ENST00000614629 552 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AL450472.3-201ENST00000615578 367 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 uc_338.12-201ENST00000616344 181 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 U7.8-201ENST00000619968 63 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC112204.3-201ENST00000623822 332 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AL732372.2-225ENST00000642124 456 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 AL353746.1-201ENST00000566293 6881 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 MTND4P12-201ENST00000498999 1377 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 MTND4P29-201ENST00000503122 1372 ntBASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCAF8Q9UPN6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SCAF8Q9UPN6 AL356274.2-201ENST00000624379 3752 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4□□□□□ -1.77
SCAF8Q9UPN6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SCAF8Q9UPN6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4□□□□□ -1.77
SCAF8Q9UPN6 RNA5SP322-201ENST00000363617 119 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 RNU6-282P-201ENST00000365357 103 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 RPL23AP32-201ENST00000395315 459 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 HSPE1P8-201ENST00000406997 288 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 RNU2-71P-201ENST00000411395 189 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 RPL21P66-201ENST00000426566 466 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 AC104850.1-201ENST00000435940 476 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4□□□□□ -1.77
SCAF8Q9UPN6 FTH1P1-201ENST00000437933 532 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 AC098614.3-201ENST00000438957 440 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4□□□□□ -1.77
SCAF8Q9UPN6 AL136380.1-201ENST00000447970 162 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 AC092001.1-201ENST00000453012 261 ntBASIC4□□□□□ -1.77
SCAF8Q9UPN6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms