Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.36□□□□□ -2.19
SCN11AQ9UI33 SNORA16B-201ENST00000364674 135 ntBASIC1.36□□□□□ -2.19
SCN11AQ9UI33 TXNP7-201ENST00000406296 293 ntBASIC1.36□□□□□ -2.19
SCN11AQ9UI33 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.36□□□□□ -2.19
SCN11AQ9UI33 AL596276.1-201ENST00000434465 418 ntBASIC1.36□□□□□ -2.19
SCN11AQ9UI33 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.36□□□□□ -2.19
SCN11AQ9UI33 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.36□□□□□ -2.19
SCN11AQ9UI33 AC021382.1-201ENST00000483523 359 ntBASIC1.36□□□□□ -2.19
SCN11AQ9UI33 AC020699.1-201ENST00000505161 445 ntBASIC1.36□□□□□ -2.19
SCN11AQ9UI33 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.36□□□□□ -2.19
SCN11AQ9UI33 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.36□□□□□ -2.19
SCN11AQ9UI33 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SCN11AQ9UI33 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SCN11AQ9UI33 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SCN11AQ9UI33 RPS29P23-201ENST00000458635 123 ntBASIC1.35□□□□□ -2.19
SCN11AQ9UI33 RNU6-1132P-201ENST00000459214 107 ntBASIC1.35□□□□□ -2.19
SCN11AQ9UI33 RPL30P14-201ENST00000482744 348 ntBASIC1.35□□□□□ -2.19
SCN11AQ9UI33 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SCN11AQ9UI33 EIF4EP5-201ENST00000528228 640 ntBASIC1.35□□□□□ -2.19
SCN11AQ9UI33 AP004247.1-201ENST00000531556 1289 ntBASIC1.35□□□□□ -2.19
SCN11AQ9UI33 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.35□□□□□ -2.19
SCN11AQ9UI33 AL445493.3-201ENST00000619568 477 ntBASIC1.35□□□□□ -2.19
SCN11AQ9UI33 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.35□□□□□ -2.19
SCN11AQ9UI33 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SCN11AQ9UI33 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.34□□□□□ -2.19
SCN11AQ9UI33 MTND4P11-201ENST00000417020 1058 ntBASIC1.34□□□□□ -2.19
SCN11AQ9UI33 ANKRD26P4-201ENST00000455755 950 ntBASIC1.34□□□□□ -2.19
SCN11AQ9UI33 AC015908.1-201ENST00000478739 476 ntBASIC1.34□□□□□ -2.19
SCN11AQ9UI33 ICE2P2-201ENST00000483823 2787 ntBASIC1.34□□□□□ -2.19
SCN11AQ9UI33 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.34□□□□□ -2.19
SCN11AQ9UI33 AC069304.3-201ENST00000603938 1084 ntBASIC1.34□□□□□ -2.19
SCN11AQ9UI33 AC108706.1-201ENST00000611053 297 ntBASIC1.34□□□□□ -2.19
SCN11AQ9UI33 AC008133.2-201ENST00000624540 351 ntBASIC1.34□□□□□ -2.19
SCN11AQ9UI33 RNA5SP62-201ENST00000363457 110 ntBASIC1.34□□□□□ -2.2
SCN11AQ9UI33 AC004022.2-201ENST00000413824 193 ntBASIC1.34□□□□□ -2.2
SCN11AQ9UI33 MTND4LP21-201ENST00000415303 295 ntBASIC1.34□□□□□ -2.2
SCN11AQ9UI33 UBE2D3P2-201ENST00000424409 445 ntBASIC1.34□□□□□ -2.2
SCN11AQ9UI33 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.34□□□□□ -2.2
SCN11AQ9UI33 EIF4EP3-201ENST00000498782 656 ntBASIC1.34□□□□□ -2.2
SCN11AQ9UI33 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.34□□□□□ -2.2
SCN11AQ9UI33 AC004062.1-201ENST00000509926 645 ntBASIC1.34□□□□□ -2.2
SCN11AQ9UI33 CR383656.8-201ENST00000549046 145 ntBASIC1.34□□□□□ -2.2
SCN11AQ9UI33 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.34□□□□□ -2.2
SCN11AQ9UI33 AC012254.4-201ENST00000588843 273 ntBASIC1.34□□□□□ -2.2
SCN11AQ9UI33 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.34□□□□□ -2.2
SCN11AQ9UI33 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
SCN11AQ9UI33 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SCN11AQ9UI33 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
SCN11AQ9UI33 EBAG9P1-201ENST00000418955 543 ntBASIC1.33□□□□□ -2.2
SCN11AQ9UI33 AL356867.1-201ENST00000429623 299 ntBASIC1.33□□□□□ -2.2
SCN11AQ9UI33 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN11AQ9UI33 RPL31P58-201ENST00000469001 379 ntBASIC1.33□□□□□ -2.2
SCN11AQ9UI33 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.33□□□□□ -2.2
SCN11AQ9UI33 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.33□□□□□ -2.2
SCN11AQ9UI33 AC096745.1-201ENST00000509945 370 ntBASIC1.33□□□□□ -2.2
SCN11AQ9UI33 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.33□□□□□ -2.2
SCN11AQ9UI33 AC022880.1-201ENST00000534017 973 ntBASIC1.33□□□□□ -2.2
SCN11AQ9UI33 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.33□□□□□ -2.2
SCN11AQ9UI33 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN11AQ9UI33 SNORD114-21-201ENST00000606412 72 ntBASIC1.33□□□□□ -2.2
SCN11AQ9UI33 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SCN11AQ9UI33 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.32□□□□□ -2.2
SCN11AQ9UI33 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SCN11AQ9UI33 RNU6-920P-201ENST00000410926 92 ntBASIC1.32□□□□□ -2.2
SCN11AQ9UI33 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.32□□□□□ -2.2
SCN11AQ9UI33 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.32□□□□□ -2.2
SCN11AQ9UI33 AL109918.3-201ENST00000603072 338 ntBASIC1.32□□□□□ -2.2
SCN11AQ9UI33 AC090525.3-201ENST00000605601 189 ntBASIC1.32□□□□□ -2.2
SCN11AQ9UI33 AL050343.2-201ENST00000607338 280 ntBASIC1.32□□□□□ -2.2
SCN11AQ9UI33 AC106052.1-201ENST00000608029 497 ntBASIC1.32□□□□□ -2.2
SCN11AQ9UI33 AC109454.4-201ENST00000623411 649 ntBASIC1.32□□□□□ -2.2
SCN11AQ9UI33 AC006963.1-201ENST00000624003 1052 ntBASIC1.32□□□□□ -2.2
SCN11AQ9UI33 RNA5SP257-201ENST00000363023 116 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 Y_RNA.251-201ENST00000364551 99 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 MIR216A-201ENST00000385063 110 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 RNA5SP498-201ENST00000411342 120 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 RNU6-516P-201ENST00000411381 104 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.31□□□□□ -2.2
SCN11AQ9UI33 ARF4P4-201ENST00000439608 520 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 AC093852.1-201ENST00000503587 266 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 HMGB1P22-201ENST00000505315 124 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.31□□□□□ -2.2
SCN11AQ9UI33 AC096656.1-201ENST00000623826 1364 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 RNU6-37P-201ENST00000362692 107 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 RNU6-11P-201ENST00000364234 107 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 MIR676-201ENST00000390702 67 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 RNU1-78P-201ENST00000391248 165 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 AL161449.1-201ENST00000414531 1199 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 OR51A5P-201ENST00000415429 942 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 HMGN2P10-201ENST00000448085 265 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 COX6CP18-201ENST00000448769 222 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 AC092989.1-201ENST00000481235 277 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.31□□□□□ -2.2
SCN11AQ9UI33 AP004371.1-201ENST00000525240 214 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 MIR3616-201ENST00000584070 92 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 MIR4295-201ENST00000585286 85 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.31□□□□□ -2.2
SCN11AQ9UI33 AL161629.2-201ENST00000615347 275 ntBASIC1.31□□□□□ -2.2
SCN11AQ9UI33 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SCN11AQ9UI33 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms