Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 RNA5SP291-201ENST00000517222 105 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AL133241.1-201ENST00000556832 487 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 MIR4419B-201ENST00000577260 68 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AP001429.1-201ENST00000602568 530 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AP000403.1-201ENST00000603349 851 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AC004853.1-201ENST00000604902 698 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AC087241.4-201ENST00000612441 480 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AC004009.2-201ENST00000623016 728 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 U6.101-201ENST00000637707 76 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 RNU6-884P-201ENST00000363889 107 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 MIR888-201ENST00000401186 77 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AL109755.1-201ENST00000401791 649 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 GSTA9P-201ENST00000406231 611 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 RN7SKP158-201ENST00000410453 326 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AL030996.1-201ENST00000411430 235 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 SFR1P2-201ENST00000421841 730 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 CR848007.2-201ENST00000424918 787 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AC007742.1-201ENST00000425789 329 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AC008850.1-201ENST00000427546 362 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 MED14P1-201ENST00000430517 648 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 ELOCP26-201ENST00000436067 329 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AC080013.2-201ENST00000460866 323 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 TRBV12-1-201ENST00000479785 344 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 RNU2-44P-201ENST00000516795 194 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AP000916.1-201ENST00000533869 835 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 CYCSP2-201ENST00000558168 301 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 MIR4287-201ENST00000579398 78 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 RPAP2P1-201ENST00000603626 1168 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 KATNBL1P1-201ENST00000605192 748 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AC091946.2-201ENST00000606105 291 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 FTX_3.1-201ENST00000610451 147 ntBASIC1.73□□□□□ -2.13
VPS29Q9UBQ0 AC010889.1-201ENST00000566193 2666 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 SNORA70B-201ENST00000384210 135 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 RNU2-33P-201ENST00000410344 192 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AC003685.2-201ENST00000422795 395 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 FAM204CP-201ENST00000424489 642 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 SDCBPP1-201ENST00000440192 890 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AC016691.1-201ENST00000441321 413 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 SNORA59A-201ENST00000459326 152 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 RNU7-140P-201ENST00000459546 60 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AC026801.1-201ENST00000497178 464 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AC091860.1-201ENST00000505723 432 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AC110588.1-201ENST00000559699 137 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AC024614.2-201ENST00000577584 372 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AL096840.1-201ENST00000603287 93 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AC069294.1-201ENST00000608397 350 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 AL627230.6-201ENST00000611129 280 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 VN1R9P-201ENST00000614184 867 ntBASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
VPS29Q9UBQ0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 RNU6-883P-201ENST00000384597 107 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 RPL30P4-201ENST00000429309 333 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AL590233.1-201ENST00000430017 456 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 TPT1P14-201ENST00000448018 505 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AC005297.2-201ENST00000450430 606 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 RPL12P25-201ENST00000455592 494 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 PMCHL2-203ENST00000457791 237 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 RN7SKP31-201ENST00000516354 278 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 HSPA8P13-201ENST00000523715 472 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AC118273.2-201ENST00000532092 465 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AL359212.1-201ENST00000556608 614 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms