Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC022893.3-201ENST00000607665 437 ntBASIC4.42□□□□□ -1.7
PPARGC1AQ9UBK2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.42□□□□□ -1.7
PPARGC1AQ9UBK2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.42□□□□□ -1.7
PPARGC1AQ9UBK2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PPARGC1AQ9UBK2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.42□□□□□ -1.7
PPARGC1AQ9UBK2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 PRO1804-201ENST00000623780 2050 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 RPL32P3-201ENST00000359025 275 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 Y_RNA.132-201ENST00000363421 102 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 RNU6-1188P-201ENST00000363795 107 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 RNU6-715P-201ENST00000365204 103 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 SNORA33.2-201ENST00000365413 134 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 EI24P1-201ENST00000416584 867 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 SKA2P1-201ENST00000425592 390 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 MTATP6P4-201ENST00000427725 675 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 AL669831.1-202ENST00000428504 417 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 Y_RNA.653-201ENST00000459091 95 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 RPL31P60-201ENST00000478450 367 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 AC091167.1-201ENST00000492017 396 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 AC025445.1-201ENST00000502728 300 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 AC020593.1-201ENST00000507399 299 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 RNA5SP49-201ENST00000516450 115 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 TOMM20P2-201ENST00000540082 421 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 AC116312.1-201ENST00000606841 314 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 AC022418.1-201ENST00000624118 445 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 MIR3653-201ENST00000625572 110 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 ZNF519P1-201ENST00000449011 1626 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 MTND5P10-201ENST00000603719 1809 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 MTCO1P12-201ENST00000414273 1543 ntBASIC4.41□□□□□ -1.7
PPARGC1AQ9UBK2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.4□□□□□ -1.7
PPARGC1AQ9UBK2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PPARGC1AQ9UBK2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PPARGC1AQ9UBK2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PPARGC1AQ9UBK2 AC009812.4-201ENST00000569134 1805 ntBASIC4.4□□□□□ -1.7
PPARGC1AQ9UBK2 SNORA63C-201ENST00000364578 129 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 CISD1P1-201ENST00000393907 327 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 RPL23AP26-201ENST00000412728 464 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 HMGB1P27-201ENST00000431429 603 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 HMGB3P22-202ENST00000451823 572 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AL163540.1-201ENST00000485382 386 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AC005921.1-201ENST00000510589 286 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AC093303.1-201ENST00000514549 295 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AC022634.1-201ENST00000520765 532 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 HIGD1AP5-201ENST00000529959 259 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 SNRPGP18-201ENST00000553000 214 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 MIR3138-201ENST00000585238 82 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 MIR5692C1-201ENST00000585309 91 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AL670379.10-201ENST00000604330 253 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AL670379.9-201ENST00000605428 253 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AL157817.1-201ENST00000614264 790 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 FAM157A-202ENST00000615155 405 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 AC010300.1-201ENST00000600671 5134 ntBASIC4.4□□□□□ -1.71
PPARGC1AQ9UBK2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC007685.1-201ENST00000329806 452 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 RNU6-562P-201ENST00000362731 107 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 RNU6-601P-201ENST00000384540 107 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AL590704.1-201ENST00000402856 794 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AL391417.1-201ENST00000404100 426 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AL445189.1-201ENST00000405722 338 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 RNA5SP36-201ENST00000410197 133 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 RPS23P7-201ENST00000466210 444 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC078918.1-201ENST00000498515 228 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 VN1R104P-201ENST00000505115 1009 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms