Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.9□□□□□ -1.95
NDE1Q9NXR1 MIR4444-2-201ENST00000584390 74 ntBASIC2.9□□□□□ -1.95
NDE1Q9NXR1 AC068790.2-201ENST00000602601 557 ntBASIC2.9□□□□□ -1.95
NDE1Q9NXR1 AP000860.1-201ENST00000605250 559 ntBASIC2.9□□□□□ -1.95
NDE1Q9NXR1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.9□□□□□ -1.95
NDE1Q9NXR1 AC245517.5-201ENST00000611529 162 ntBASIC2.9□□□□□ -1.95
NDE1Q9NXR1 AC006338.1-201ENST00000618453 749 ntBASIC2.9□□□□□ -1.95
NDE1Q9NXR1 CR392039.5-201ENST00000623201 510 ntBASIC2.9□□□□□ -1.95
NDE1Q9NXR1 AC068880.5-201ENST00000624331 290 ntBASIC2.9□□□□□ -1.95
NDE1Q9NXR1 PISRT1-201ENST00000626175 531 ntBASIC2.9□□□□□ -1.95
NDE1Q9NXR1 AC244258.1-201ENST00000637553 1071 ntBASIC2.9□□□□□ -1.95
NDE1Q9NXR1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NDE1Q9NXR1 FAM35BP-202ENST00000497389 3337 ntBASIC2.9□□□□□ -1.95
NDE1Q9NXR1 AL138713.1-201ENST00000624026 2130 ntBASIC2.9□□□□□ -1.95
NDE1Q9NXR1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 MTND4P5-201ENST00000435821 1374 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 MTND5P29-201ENST00000458676 1807 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 RNY3P13-201ENST00000365542 102 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 RNU6-432P-201ENST00000384196 109 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 RNU6-1042P-201ENST00000384204 107 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 Y_RNA.505-201ENST00000384489 102 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC127391.1-201ENST00000411737 98 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC069157.1-201ENST00000421749 137 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 RPL36AP6-201ENST00000435770 321 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 ARPC3P1-201ENST00000437218 533 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC004866.2-201ENST00000438285 481 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 USP9YP15-201ENST00000442391 422 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC079448.1-201ENST00000449377 373 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC104472.2-201ENST00000469035 601 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 RPL7P49-201ENST00000471402 708 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 RBM43P1-201ENST00000476891 1081 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 RPS29P2-201ENST00000479278 136 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 RPL37P25-201ENST00000507308 276 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC103783.1-201ENST00000520506 373 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AP003033.1-201ENST00000527244 415 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 DEFB108D-201ENST00000527787 222 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC109635.4-202ENST00000531666 412 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AP000857.1-201ENST00000532151 543 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC107016.2-201ENST00000547968 190 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 FAM60BP-201ENST00000578364 658 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 DUXAP4-201ENST00000603046 613 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC090970.3-201ENST00000612566 866 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AL133173.2-201ENST00000614270 90 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AC019226.1-201ENST00000625666 515 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 MIR622-201ENST00000638396 96 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 FARSBP1-201ENST00000435808 1778 ntBASIC2.89□□□□□ -1.95
NDE1Q9NXR1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NDE1Q9NXR1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 RNU6-259P-201ENST00000383999 107 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 RNU6-1215P-201ENST00000384441 102 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 MIR7-3-201ENST00000384898 110 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 MIR218-2-201ENST00000385006 110 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 RNU6-192P-201ENST00000391253 100 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AF274854.1-201ENST00000413236 615 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 UBE2FP1-201ENST00000416536 447 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 YME1L1P1-201ENST00000429435 297 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC018644.1-201ENST00000429934 551 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC119618.1-201ENST00000434191 222 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 RPS24P6-201ENST00000452670 400 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 RN7SL297P-201ENST00000483161 293 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 RPS15AP36-201ENST00000492022 382 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 RNU1-95P-201ENST00000516357 160 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 RNU1-128P-201ENST00000516704 160 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 RNA5SP337-201ENST00000517007 109 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms