Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 TAF9P1-201ENST00000445421 515 ntBASIC2.26□□□□□ -2.05
USP42Q9H9J4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.26□□□□□ -2.05
USP42Q9H9J4 TAF9P2-201ENST00000454958 515 ntBASIC2.26□□□□□ -2.05
USP42Q9H9J4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USP42Q9H9J4 AC140059.1-201ENST00000489238 361 ntBASIC2.26□□□□□ -2.05
USP42Q9H9J4 AC023424.2-201ENST00000493479 777 ntBASIC2.26□□□□□ -2.05
USP42Q9H9J4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.26□□□□□ -2.05
USP42Q9H9J4 SNORA31.18-201ENST00000517043 134 ntBASIC2.26□□□□□ -2.05
USP42Q9H9J4 AC087808.1-201ENST00000520501 361 ntBASIC2.26□□□□□ -2.05
USP42Q9H9J4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.26□□□□□ -2.05
USP42Q9H9J4 MIR4789-201ENST00000577469 82 ntBASIC2.26□□□□□ -2.05
USP42Q9H9J4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USP42Q9H9J4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.26□□□□□ -2.05
USP42Q9H9J4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USP42Q9H9J4 ZNF849P-201ENST00000594711 1566 ntBASIC2.26□□□□□ -2.05
USP42Q9H9J4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USP42Q9H9J4 DBF4P1-201ENST00000412976 1892 ntBASIC2.26□□□□□ -2.05
USP42Q9H9J4 Z82209.1-201ENST00000422141 2135 ntBASIC2.26□□□□□ -2.05
USP42Q9H9J4 PABPC1P9-201ENST00000426076 1612 ntBASIC2.26□□□□□ -2.05
USP42Q9H9J4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
USP42Q9H9J4 RNU6-792P-201ENST00000363490 107 ntBASIC2.25□□□□□ -2.05
USP42Q9H9J4 U6.112-201ENST00000384129 70 ntBASIC2.25□□□□□ -2.05
USP42Q9H9J4 RNA5SP489-201ENST00000410986 109 ntBASIC2.25□□□□□ -2.05
USP42Q9H9J4 TAAR7P-201ENST00000436141 242 ntBASIC2.25□□□□□ -2.05
USP42Q9H9J4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.25□□□□□ -2.05
USP42Q9H9J4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.25□□□□□ -2.05
USP42Q9H9J4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.25□□□□□ -2.05
USP42Q9H9J4 AC112518.2-201ENST00000508565 425 ntBASIC2.25□□□□□ -2.05
USP42Q9H9J4 HMGB3P3-201ENST00000510526 400 ntBASIC2.25□□□□□ -2.05
USP42Q9H9J4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.25□□□□□ -2.05
USP42Q9H9J4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.25□□□□□ -2.05
USP42Q9H9J4 AC013553.2-201ENST00000604244 589 ntBASIC2.25□□□□□ -2.05
USP42Q9H9J4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.25□□□□□ -2.05
USP42Q9H9J4 U6.101-201ENST00000637707 76 ntBASIC2.25□□□□□ -2.05
USP42Q9H9J4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
USP42Q9H9J4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.25□□□□□ -2.05
USP42Q9H9J4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
USP42Q9H9J4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USP42Q9H9J4 RNU6-1066P-201ENST00000363573 105 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 SNORA38-201ENST00000363946 132 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 SNORA67.1-201ENST00000364749 141 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
USP42Q9H9J4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USP42Q9H9J4 RNU6-575P-201ENST00000411326 105 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 RPS7P9-201ENST00000414704 586 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.24□□□□□ -2.05
USP42Q9H9J4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.24□□□□□ -2.05
USP42Q9H9J4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.24□□□□□ -2.05
USP42Q9H9J4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.24□□□□□ -2.05
USP42Q9H9J4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 UBE2V1P13-201ENST00000436983 439 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 FGF7P5-201ENST00000441829 291 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.24□□□□□ -2.05
USP42Q9H9J4 AC011753.1-201ENST00000451001 220 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 TPRKBP1-201ENST00000456243 481 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 AL135752.1-201ENST00000479477 471 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 RNU6-1256P-201ENST00000516539 103 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 RNU1-104P-201ENST00000517280 175 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 IGLV3-17-201ENST00000519099 244 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.24□□□□□ -2.05
USP42Q9H9J4 OR4R1P-201ENST00000529879 463 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 AL049838.1-201ENST00000563647 981 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 MTATP6P25-201ENST00000574491 261 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 AL590099.1-201ENST00000615276 138 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 AC090132.2-201ENST00000615881 347 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.24□□□□□ -2.05
USP42Q9H9J4 AP003399.1-201ENST00000637534 361 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 MAPK10-266ENST00000641066 6555 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 AC005832.2-201ENST00000538921 1430 ntBASIC2.24□□□□□ -2.05
USP42Q9H9J4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.24□□□□□ -2.05
USP42Q9H9J4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
USP42Q9H9J4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
USP42Q9H9J4 Y_RNA.118-201ENST00000363300 101 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 Y_RNA.269-201ENST00000364685 89 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 AL356131.1-201ENST00000405826 414 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 MTND3P20-201ENST00000407663 186 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 RPL23AP39-201ENST00000415533 405 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 Z85995.1-201ENST00000415547 335 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.23□□□□□ -2.05
USP42Q9H9J4 DEFB130D-201ENST00000426866 237 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 GTF2IP20-201ENST00000431663 360 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.23□□□□□ -2.05
USP42Q9H9J4 MTCO3P43-201ENST00000440974 771 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 AC092473.1-201ENST00000441098 221 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 RNU7-95P-201ENST00000459222 64 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 SUMO2P6-201ENST00000505273 288 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 RNU6-1282P-201ENST00000516735 96 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 AC006518.2-201ENST00000542513 940 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 AC007115.1-201ENST00000546853 234 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.23□□□□□ -2.05
USP42Q9H9J4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.23□□□□□ -2.05
USP42Q9H9J4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.23□□□□□ -2.05
USP42Q9H9J4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.23□□□□□ -2.05
USP42Q9H9J4 AP001542.2-201ENST00000593141 364 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 AC103710.4-201ENST00000609301 899 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 AC008443.7-201ENST00000622195 246 ntBASIC2.23□□□□□ -2.05
USP42Q9H9J4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms