Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AP001004.1-201ENST00000582468 324 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 MIR4325-201ENST00000583049 90 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 MIR4635-201ENST00000583759 79 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AL356575.1-201ENST00000603008 283 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC112187.2-201ENST00000604345 283 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC008277.2-201ENST00000605196 797 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC107214.2-201ENST00000608204 634 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC021755.4-201ENST00000616620 456 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 MIR422A-201ENST00000362286 90 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 RNU6-884P-201ENST00000363889 107 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 MIR888-201ENST00000401186 77 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AL139397.2-201ENST00000404529 772 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AL831737.1-201ENST00000441288 271 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AC009296.1-201ENST00000443146 155 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 UBBP3-201ENST00000445497 241 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 RPL31P41-201ENST00000477967 372 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 RPL23AP41-201ENST00000484754 458 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 RPL36AP51-201ENST00000487216 318 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 RPS29P20-201ENST00000489592 171 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 RN7SKP258-201ENST00000517151 304 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AP003461.1-201ENST00000528866 78 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 ISCA1P3-201ENST00000577104 373 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 MIR3200-201ENST00000580767 85 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AC019159.1-201ENST00000605094 187 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AC103710.1-201ENST00000610003 901 ntBASIC2.78□□□□□ -1.96
DDX47Q9H0S4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX47Q9H0S4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 CR848007.1-201ENST00000442354 1699 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 Y_RNA.97-201ENST00000363094 102 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 SNORA18.3-201ENST00000384122 132 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 U8.14-201ENST00000390843 143 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AL138885.1-201ENST00000405921 675 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 HMGN2P35-201ENST00000412164 270 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 RPL17P12-201ENST00000413391 526 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AL513477.1-202ENST00000417061 214 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 USP9YP13-201ENST00000417797 480 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 FCF1P1-201ENST00000432690 571 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AL671855.1-201ENST00000446875 1203 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AC027673.1-201ENST00000456245 405 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 MTCO1P42-201ENST00000457379 726 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AC022634.1-201ENST00000520765 532 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 SUB1P1-201ENST00000524415 382 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AC007954.1-201ENST00000554198 494 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AC245517.5-201ENST00000611529 162 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AC008498.1-201ENST00000613012 531 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AL162274.2-201ENST00000614406 332 ntBASIC2.77□□□□□ -1.97
DDX47Q9H0S4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX47Q9H0S4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
DDX47Q9H0S4 Y_RNA.46-201ENST00000362695 102 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 RNY4P24-201ENST00000362735 96 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 Y_RNA.245-201ENST00000364493 95 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 DEFA7P-201ENST00000382676 285 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 RNA5SP492-201ENST00000411330 114 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.76□□□□□ -1.97
DDX47Q9H0S4 XKRYP1-201ENST00000423438 492 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 ELOCP14-201ENST00000428070 331 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.76□□□□□ -1.97
DDX47Q9H0S4 AL139132.1-201ENST00000431587 344 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 XKRYP2-201ENST00000432915 492 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.76□□□□□ -1.97
DDX47Q9H0S4 MTND1P28-201ENST00000435623 950 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 TIMM9P1-201ENST00000436122 256 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 SNRPEP9-201ENST00000436794 238 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 ELOCP7-201ENST00000439968 331 ntBASIC2.76□□□□□ -1.97
DDX47Q9H0S4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.76□□□□□ -1.97
DDX47Q9H0S4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX47Q9H0S4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms