Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.6□□□□□ -1.83
USP44Q9H0E7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.6□□□□□ -1.83
USP44Q9H0E7 NRBF2P1-201ENST00000587407 859 ntBASIC3.6□□□□□ -1.83
USP44Q9H0E7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.6□□□□□ -1.83
USP44Q9H0E7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.6□□□□□ -1.83
USP44Q9H0E7 AC022146.1-201ENST00000595307 847 ntBASIC3.6□□□□□ -1.83
USP44Q9H0E7 AC010133.1-201ENST00000615809 842 ntBASIC3.6□□□□□ -1.83
USP44Q9H0E7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.6□□□□□ -1.83
USP44Q9H0E7 AC006386.2-201ENST00000624491 75 ntBASIC3.6□□□□□ -1.83
USP44Q9H0E7 AC012005.1-201ENST00000624575 75 ntBASIC3.6□□□□□ -1.83
USP44Q9H0E7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
USP44Q9H0E7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.6□□□□□ -1.83
USP44Q9H0E7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP44Q9H0E7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
USP44Q9H0E7 FAT1P1-201ENST00000406588 507 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 YPEL5P1-201ENST00000419731 367 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 MTCO2P34-201ENST00000421994 607 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 PGBD4P3-201ENST00000440731 581 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 SNORD97-201ENST00000459187 142 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AP001486.1-201ENST00000463339 476 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AC096576.1-201ENST00000489014 359 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 HMGB3P15-201ENST00000507326 574 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 RNU2-10P-201ENST00000516375 211 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 AC124947.2-202ENST00000552735 133 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 LARP7P3-201ENST00000579888 337 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AC103987.3-201ENST00000582071 292 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 AC009977.1-201ENST00000586015 570 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AC024153.1-201ENST00000603103 365 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AL137843.1-201ENST00000605078 385 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AC009570.1-201ENST00000609599 745 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 AC139792.2-201ENST00000624218 587 ntBASIC3.59□□□□□ -1.83
USP44Q9H0E7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.59□□□□□ -1.83
USP44Q9H0E7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.84
USP44Q9H0E7 AL137003.2-201ENST00000606924 2538 ntBASIC3.59□□□□□ -1.84
USP44Q9H0E7 AC091152.2-201ENST00000591628 2569 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 FARSBP1-201ENST00000435808 1778 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 FAM35BP-202ENST00000497389 3337 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
USP44Q9H0E7 AL513331.1-201ENST00000411908 397 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 RPS3AP3-201ENST00000411933 242 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 SPA17P1-201ENST00000416656 452 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 AC019097.1-201ENST00000424783 735 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.58□□□□□ -1.84
USP44Q9H0E7 HMGN2P20-201ENST00000437531 273 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 AC009237.8-201ENST00000445492 379 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 NIPA2P5-201ENST00000452282 464 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 TPTE2P5-203ENST00000458118 728 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP44Q9H0E7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.58□□□□□ -1.84
USP44Q9H0E7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.58□□□□□ -1.84
USP44Q9H0E7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.58□□□□□ -1.84
USP44Q9H0E7 AC123904.3-201ENST00000547218 814 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.58□□□□□ -1.84
USP44Q9H0E7 MIR3118-1-201ENST00000581787 76 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.58□□□□□ -1.84
USP44Q9H0E7 AC131902.3-201ENST00000611767 581 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 MIR6076-201ENST00000617521 113 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 AC009509.4-201ENST00000619202 509 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 AC099654.13-201ENST00000639774 207 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
USP44Q9H0E7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
USP44Q9H0E7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
USP44Q9H0E7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP44Q9H0E7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.58□□□□□ -1.84
USP44Q9H0E7 AC022336.2-201ENST00000568966 2538 ntBASIC3.58□□□□□ -1.84
USP44Q9H0E7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
USP44Q9H0E7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP44Q9H0E7 TPTE2P4-201ENST00000258589 1605 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 OR5J1P-201ENST00000313544 939 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 SNORA40.3-201ENST00000390964 122 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 RNU6-1197P-201ENST00000391183 107 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AL122016.1-201ENST00000403365 367 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AL592148.1-201ENST00000413568 445 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.57□□□□□ -1.84
USP44Q9H0E7 COTL1P1-201ENST00000422309 375 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.57□□□□□ -1.84
USP44Q9H0E7 AL589823.1-201ENST00000429577 183 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.57□□□□□ -1.84
USP44Q9H0E7 USP9YP15-201ENST00000442391 422 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.57□□□□□ -1.84
USP44Q9H0E7 MTND6P13-201ENST00000443510 523 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.57□□□□□ -1.84
USP44Q9H0E7 MTCO2P7-201ENST00000446518 666 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AL049873.1-201ENST00000480540 376 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AC082651.2-201ENST00000496833 166 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms