Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL158032.1-201ENST00000605401 106 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC103710.3-201ENST00000608157 948 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 Z82243.1-201ENST00000609432 473 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC012409.4-201ENST00000612923 249 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC015967.1-201ENST00000619893 476 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 MIR6075-201ENST00000620782 95 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AL133216.2-202ENST00000634512 349 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 IPO8P1-201ENST00000455509 3109 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 LARP1BP1-201ENST00000506036 1359 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 UBE3AP2-201ENST00000429033 2259 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 Y_RNA.167-201ENST00000363735 109 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 Y_RNA.414-201ENST00000384011 101 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 Y_RNA.431-201ENST00000384086 102 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 RNU6-14P-201ENST00000384630 106 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 SAR1AP4-201ENST00000429225 591 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AC020550.1-201ENST00000447385 163 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AL358232.1-201ENST00000448030 501 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 SNORD108-201ENST00000459332 71 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 RPS27AP13-201ENST00000498403 237 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 MTCO3P9-201ENST00000506989 781 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AC026726.1-201ENST00000512859 601 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 RN7SKP60-201ENST00000516985 239 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 RNU6-840P-201ENST00000517275 65 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 RPL23AP84-201ENST00000571193 464 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 MIR3158-1-201ENST00000583596 81 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AL161729.3-201ENST00000603533 673 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AL592436.1-201ENST00000605135 558 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 CTHRC1P1-201ENST00000605383 469 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AL160413.1-201ENST00000622780 310 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AL356489.2-201ENST00000566968 3528 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AL365440.1-201ENST00000436135 2167 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 AC121333.1-201ENST00000567488 2709 ntBASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.76□□□□□ -1.81
AMBRA1Q9C0C7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 AP001350.1-201ENST00000601906 1524 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 SPRR2C-201ENST00000290702 219 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 FRG1CP-201ENST00000358464 769 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 MIR383-201ENST00000362257 73 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 RN7SKP44-201ENST00000363602 316 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 SNORD35B-201ENST00000363660 87 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 U3.15-201ENST00000365398 212 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 RNA5SP235-201ENST00000365411 114 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 Y_RNA.419-201ENST00000384041 102 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 RNA5SP111-201ENST00000411386 101 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 POLHP1-201ENST00000411806 470 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 RPS6P12-201ENST00000432491 726 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 AC024082.2-201ENST00000434771 238 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 RNA5SP246-201ENST00000458909 119 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 GMPSP1-201ENST00000514075 579 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 RNU6-864P-201ENST00000516256 108 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 RN7SKP258-201ENST00000517151 304 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 RNU1-45P-201ENST00000517191 141 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 OR11H5P-201ENST00000554039 926 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 AL442663.2-201ENST00000554385 511 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 TVP23BP1-201ENST00000557500 617 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 AC006130.2-201ENST00000586202 326 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 uc_338.15-201ENST00000615470 191 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 MIR8059-201ENST00000620427 81 ntBASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
AMBRA1Q9C0C7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms