Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC113192.3-201ENST00000529152 742 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC007375.1-201ENST00000554513 578 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC093510.2-201ENST00000562820 896 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC068790.3-201ENST00000602988 553 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC068944.2-201ENST00000610373 403 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 CR589904.2-201ENST00000612533 440 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 uc_338.14-201ENST00000613162 166 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AP003476.1-201ENST00000623984 516 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AL359854.1-201ENST00000614203 1594 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 GDI2P1-201ENST00000429312 1336 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 RNU6-884P-201ENST00000363889 107 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 MIR670-201ENST00000390142 98 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 RNA5SP184-201ENST00000411071 108 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 SFR1P2-201ENST00000421841 730 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC025750.2-201ENST00000442609 450 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 H2AFZP6-201ENST00000444403 394 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC108938.1-201ENST00000451204 136 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 SNORA84-201ENST00000459229 133 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 SNORA31.22-201ENST00000517204 135 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AP001646.1-201ENST00000527936 915 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC023825.1-201ENST00000566704 1030 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC068313.1-201ENST00000604028 1008 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC104763.2-201ENST00000604179 382 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC245100.7-201ENST00000609678 442 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC025034.2-201ENST00000623264 286 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 CTSLP2-204ENST00000629029 392 ntBASIC1.11□□□□□ -2.23
VPS25Q9BRG1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VPS25Q9BRG1 AC110491.1-201ENST00000562191 2010 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 RNU6-251P-201ENST00000363235 104 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
VPS25Q9BRG1 RNU6-140P-201ENST00000384566 108 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL449283.1-202ENST00000418249 604 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS25Q9BRG1 HMGN2P10-201ENST00000448085 265 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC244505.3-201ENST00000454598 187 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 SUMO2P2-201ENST00000456482 255 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 FTH1P2-201ENST00000466086 412 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 S100A11P2-201ENST00000467589 312 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 SNORA67.7-201ENST00000516664 135 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 IGKV3-31-201ENST00000523109 329 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VPS25Q9BRG1 DNAJC19P3-201ENST00000594491 331 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS25Q9BRG1 RPP40P2-201ENST00000603596 712 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL670379.6-201ENST00000603753 252 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 MTCYBP22-201ENST00000603788 447 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL670379.11-201ENST00000604059 253 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL670379.10-201ENST00000604330 253 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC008162.1-201ENST00000604718 254 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL670379.1-201ENST00000604752 252 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL670379.2-201ENST00000604983 252 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL670379.5-201ENST00000605253 252 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL670379.4-201ENST00000605279 254 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL670379.12-201ENST00000605291 253 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL670379.8-201ENST00000605353 252 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL670379.9-201ENST00000605428 253 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC005000.2-201ENST00000605468 310 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL670379.7-201ENST00000605823 252 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS25Q9BRG1 MIR5739-201ENST00000619803 80 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC007490.1-201ENST00000624321 703 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS25Q9BRG1 AC091812.1-201ENST00000432235 1948 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.1□□□□□ -2.23
VPS25Q9BRG1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
VPS25Q9BRG1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
VPS25Q9BRG1 Y_RNA.126-201ENST00000363382 111 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 RNU1-73P-201ENST00000383971 164 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 MIR320A-201ENST00000385302 82 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AL139098.1-201ENST00000407291 389 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 RPS3AP25-201ENST00000411660 793 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AL445183.3-201ENST00000414168 502 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AL513185.2-201ENST00000425543 193 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms