Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC007998.5-201ENST00000622938 237 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.56□□□□□ -2
PKNOX2Q96KN3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.56□□□□□ -2
PKNOX2Q96KN3 MTND5P1-201ENST00000445440 1375 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 AC005539.1-201ENST00000443768 1479 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 AL390862.1-201ENST00000635467 1469 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PKNOX2Q96KN3 RNU6-741P-201ENST00000383889 107 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 RNU6-1000P-201ENST00000391066 106 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 CCDC58P2-201ENST00000417131 366 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 RPL35AP12-201ENST00000425362 338 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 MTND4P6-201ENST00000438297 472 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.55□□□□□ -2
PKNOX2Q96KN3 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 RPL18AP17-201ENST00000455326 198 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 AP001486.1-201ENST00000463339 476 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 AL358832.1-201ENST00000497800 389 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.55□□□□□ -2
PKNOX2Q96KN3 HIGD1AP13-201ENST00000509878 289 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 AC098591.2-201ENST00000510152 315 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 RNA5SP341-201ENST00000516261 117 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 AC243972.3-201ENST00000539655 198 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 MIR3122-201ENST00000577243 73 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 AC090615.1-201ENST00000577519 154 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 AC010928.2-201ENST00000588017 287 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.55□□□□□ -2
PKNOX2Q96KN3 DNAJC19P3-201ENST00000594491 331 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 VN1R83P-201ENST00000595685 445 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 MIR92B-201ENST00000607575 96 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.55□□□□□ -2
PKNOX2Q96KN3 AC016717.2-201ENST00000609089 5141 ntBASIC2.55□□□□□ -2
PKNOX2Q96KN3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PKNOX2Q96KN3 ADAM3A-203ENST00000461344 2157 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PKNOX2Q96KN3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
PKNOX2Q96KN3 AL031679.1-201ENST00000400616 525 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.54□□□□□ -2
PKNOX2Q96KN3 ATP5F1P1-201ENST00000433775 569 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 AC098826.1-201ENST00000433943 471 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 AC104978.1-201ENST00000449387 391 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.54□□□□□ -2
PKNOX2Q96KN3 AC006499.2-201ENST00000513470 337 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 AC093677.1-201ENST00000514414 678 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 AC010376.1-201ENST00000522101 334 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.54□□□□□ -2
PKNOX2Q96KN3 AC005832.3-201ENST00000537929 631 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 AC007151.1-201ENST00000572774 483 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 MTND3P13-201ENST00000574391 343 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 AC090079.2-201ENST00000575289 768 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.54□□□□□ -2
PKNOX2Q96KN3 AP001269.3-201ENST00000588718 329 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.54□□□□□ -2
PKNOX2Q96KN3 BNIP3P31-201ENST00000604515 566 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 AC104763.3-201ENST00000613765 618 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.54□□□□□ -2
PKNOX2Q96KN3 AC009487.4-201ENST00000624969 3585 ntBASIC2.54□□□□□ -2
PKNOX2Q96KN3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PKNOX2Q96KN3 RNU6-28P-201ENST00000362378 107 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 RNU6-76P-201ENST00000384060 104 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 MIR888-201ENST00000401186 77 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 MTATP6P19-201ENST00000413797 659 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 TPMTP2-201ENST00000414372 726 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 ARPC3P5-201ENST00000448802 534 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 RPL23AP7-203ENST00000449021 469 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 RNA5SP137-201ENST00000516833 135 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 SNORA31.22-201ENST00000517204 135 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 AL132657.2-201ENST00000564417 358 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.53□□□□□ -2
PKNOX2Q96KN3 SRGNP1-201ENST00000603392 451 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 AC013562.2-201ENST00000611632 603 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 AL138478.1-201ENST00000612252 832 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 MIR6130-201ENST00000619419 109 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 AP002371.2-201ENST00000624450 503 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 MIR4275-201ENST00000636486 87 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 AC106858.1-201ENST00000637497 429 ntBASIC2.53□□□□□ -2
PKNOX2Q96KN3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AL079343.1-201ENST00000572358 1771 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 MIR514A1-201ENST00000385133 98 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 SNORA40.19-201ENST00000390846 128 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AL590084.1-201ENST00000407885 387 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AL449283.1-202ENST00000418249 604 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AL109913.1-201ENST00000421173 514 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AL139421.1-201ENST00000423010 169 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AC087499.2-201ENST00000432861 149 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms