Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC091544.4-201ENST00000555268 342 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 AC004987.4-201ENST00000603383 338 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 FTX_3.1-201ENST00000610451 147 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 PART1_2.1-201ENST00000612397 250 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 MIR6766-201ENST00000622641 72 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 AC064859.1-201ENST00000624741 174 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 Z82209.1-201ENST00000422141 2135 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 CCT4P2-201ENST00000233836 1548 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 Y_RNA.311-201ENST00000365068 96 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 RNU6-413P-201ENST00000384115 107 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 MIR1284-201ENST00000408337 120 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 RNA5SP508-201ENST00000411327 119 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 MTCYBP38-201ENST00000417160 1123 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 MTCO3P30-201ENST00000426425 670 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AL356320.1-201ENST00000429616 163 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 ZYG11AP1-201ENST00000430329 837 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 Z80107.1-201ENST00000436830 412 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC007327.1-201ENST00000447461 264 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC233279.1-201ENST00000455300 423 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 MRPS17P3-201ENST00000465453 385 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 RPL23AP49-201ENST00000492925 468 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC008413.1-201ENST00000511864 177 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC022634.1-201ENST00000520765 532 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC087465.1-201ENST00000560574 245 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC090079.2-201ENST00000575289 768 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 HMGN2P15-201ENST00000585707 270 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 TPMTP1-201ENST00000592307 737 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AL356280.1-201ENST00000603614 379 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC021749.1-201ENST00000604322 607 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 HMGB1P24-202ENST00000615653 685 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AP002371.2-201ENST00000624450 503 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC019226.1-201ENST00000625666 515 ntBASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ECHDC3Q96DC8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 RN7SKP226-201ENST00000364912 300 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 RNU6-744P-201ENST00000365557 107 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 RNU1-73P-201ENST00000383971 164 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 RNU6-1316P-201ENST00000384242 108 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 SNORD116-12-201ENST00000384468 92 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 MIR524-201ENST00000385242 87 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AL356421.1-201ENST00000403255 413 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AL513331.1-201ENST00000411908 397 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AC023141.4-201ENST00000412031 328 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 ZNF863P-201ENST00000426746 417 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AC011753.1-201ENST00000451001 220 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 USP9YP10-201ENST00000454868 628 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AC024589.1-201ENST00000512207 263 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 SNRPGP18-201ENST00000553000 214 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AL139344.1-201ENST00000605228 195 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AC107075.1-201ENST00000613695 314 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 TUG1_2.1-201ENST00000614234 87 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AL138960.2-201ENST00000625145 535 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 AC004808.1-201ENST00000627671 721 ntBASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ECHDC3Q96DC8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ECHDC3Q96DC8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ECHDC3Q96DC8 AL137003.2-201ENST00000606924 2538 ntBASIC2.27□□□□□ -2.05
ECHDC3Q96DC8 RNU6-301P-201ENST00000384277 107 ntBASIC2.27□□□□□ -2.05
ECHDC3Q96DC8 RNU6-140P-201ENST00000384566 108 ntBASIC2.27□□□□□ -2.05
ECHDC3Q96DC8 RSL24D1P4-201ENST00000400938 484 ntBASIC2.27□□□□□ -2.05
ECHDC3Q96DC8 MIR888-201ENST00000401186 77 ntBASIC2.27□□□□□ -2.05
ECHDC3Q96DC8 AL136310.1-201ENST00000404926 654 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms