Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNU6-278P-201ENST00000390945 109 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL356967.1-201ENST00000406305 431 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 RNU2-62P-201ENST00000410868 191 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL513477.1-202ENST00000417061 214 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 MRPL50P4-201ENST00000446432 475 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 Z75741.1-201ENST00000446793 314 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 ZNF114P1-201ENST00000453500 292 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 SNRPFP4-201ENST00000456366 242 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC010486.2-201ENST00000505572 483 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 OR5BM1P-201ENST00000512021 366 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 TBCAP3-201ENST00000512475 312 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC116347.2-201ENST00000514912 523 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC026407.1-201ENST00000518369 204 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 HMGB1P41-201ENST00000520234 440 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC022616.6-201ENST00000520479 119 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AP002404.1-201ENST00000532005 451 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC123904.2-201ENST00000548059 300 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC009163.5-201ENST00000575421 637 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 MIR3605-201ENST00000583214 100 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 MIR3158-1-201ENST00000583596 81 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL136363.1-201ENST00000605349 337 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC012360.2-201ENST00000609349 391 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL161734.1-201ENST00000609720 557 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 BX664608.1-201ENST00000610519 487 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AC090970.3-201ENST00000612566 866 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 U6.105-201ENST00000637379 88 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 ZNF271P-202ENST00000465539 1970 ntBASIC2.27□□□□□ -2.05
RPUSD4Q96CM3 MTND4P4-201ENST00000439033 1366 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC073325.2-201ENST00000339545 159 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 MIR22-201ENST00000362190 85 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 SNORA25.6-201ENST00000364121 118 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 SNORD21-201ENST00000383953 95 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 RNU6-533P-201ENST00000384144 107 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 RNU6-198P-201ENST00000384258 104 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 RNU6-809P-201ENST00000384461 107 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 MIR183-201ENST00000384958 110 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 USP9YP13-201ENST00000417797 480 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 MED14P1-201ENST00000430517 648 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC093156.1-201ENST00000440382 670 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 EPS15P1-201ENST00000448836 336 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 SNRPGP6-201ENST00000451124 220 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC092798.1-201ENST00000458542 409 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 RNU7-23P-201ENST00000459465 62 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 MTCO2P29-201ENST00000465212 189 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC034236.1-201ENST00000469891 373 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AL160314.1-201ENST00000490836 438 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 RPF2P2-201ENST00000504693 896 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 FABP5P5-201ENST00000515537 406 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 RNU6-759P-201ENST00000516740 103 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 SNORA31.21-201ENST00000517180 77 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 MTND4LP18-201ENST00000526864 291 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC022878.1-201ENST00000530684 149 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 MIR5680-201ENST00000577577 84 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC002545.1-201ENST00000592511 181 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AL356575.1-201ENST00000603008 283 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms