Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HLA-CQ95604 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
HLA-CQ95604 RNU6-78P-201ENST00000362897 107 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 Y_RNA.568-201ENST00000384742 113 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 MIR153-1-201ENST00000384914 90 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 RNA5SP332-201ENST00000391063 115 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 MIR1290-201ENST00000408735 78 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 RPL23AP26-201ENST00000412728 464 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-CQ95604 CRIP1P1-201ENST00000427567 185 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 AL356867.1-201ENST00000429623 299 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 UQCRBP2-201ENST00000447827 297 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 AL353705.4-201ENST00000449661 238 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-CQ95604 RN7SL244P-201ENST00000493405 297 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 AC093815.1-201ENST00000508637 280 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-CQ95604 AC006115.2-201ENST00000596823 202 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 AC105254.2-201ENST00000603636 436 ntBASIC5.55□□□□□ -1.52
HLA-CQ95604 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-CQ95604 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-CQ95604 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-CQ95604 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-CQ95604 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-CQ95604 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HLA-CQ95604 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-CQ95604 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-CQ95604 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-CQ95604 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-CQ95604 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HLA-CQ95604 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
HLA-CQ95604 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-CQ95604 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-CQ95604 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
HLA-CQ95604 AC090971.4-201ENST00000560291 1800 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 RNA5SP388-201ENST00000362584 119 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 Y_RNA.400-201ENST00000383963 111 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 SNORA48.7-201ENST00000391302 135 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 AC091390.3-201ENST00000426478 338 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 AL162725.1-201ENST00000435405 301 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 AC092798.1-201ENST00000458542 409 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 AC092754.1-201ENST00000472975 479 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 AC005840.1-201ENST00000498412 377 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 SNORA40.9-201ENST00000515895 93 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 AC027369.5-201ENST00000533838 755 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-CQ95604 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-CQ95604 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-CQ95604 MIR4782-201ENST00000577987 79 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 AC067852.5-201ENST00000589299 310 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 AC008749.1-201ENST00000597650 306 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 AC091895.1-201ENST00000624494 256 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-CQ95604 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-CQ95604 ADAM24P-201ENST00000398655 2101 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-CQ95604 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-CQ95604 AP002512.4-202ENST00000641599 4530 ntBASIC5.54□□□□□ -1.52
HLA-CQ95604 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-CQ95604 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HLA-CQ95604 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-CQ95604 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-CQ95604 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-CQ95604 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-CQ95604 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HLA-CQ95604 AC099654.2-201ENST00000433031 1980 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-CQ95604 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-CQ95604 RNU6-105P-201ENST00000363909 104 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 Y_RNA.308-201ENST00000365043 101 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 Y_RNA.488-201ENST00000384403 102 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 SNORA22C-201ENST00000384614 134 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-CQ95604 OOSP1P1-201ENST00000423265 274 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-CQ95604 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-CQ95604 POLR2KP2-201ENST00000438155 177 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 AP000870.1-201ENST00000472927 406 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 RN7SKP21-201ENST00000516503 220 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 RNA5SP290-201ENST00000517133 127 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-CQ95604 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-CQ95604 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-CQ95604 AL591926.8-201ENST00000616876 211 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 IGHVIII-44-202ENST00000636235 289 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.53□□□□□ -1.52
HLA-CQ95604 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-CQ95604 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-CQ95604 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-CQ95604 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-CQ95604 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-CQ95604 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-CQ95604 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-CQ95604 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-CQ95604 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
HLA-CQ95604 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-CQ95604 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms