Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 RNA5SP392-201ENST00000516905 112 ntBASIC4.09□□□□□ -1.75
DTX3Q8N9I9 Y_RNA.719-201ENST00000517156 106 ntBASIC4.09□□□□□ -1.75
DTX3Q8N9I9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 AC104576.1-201ENST00000524225 88 ntBASIC4.09□□□□□ -1.75
DTX3Q8N9I9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 SNRPGP16-201ENST00000533275 226 ntBASIC4.09□□□□□ -1.75
DTX3Q8N9I9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 AC113195.1-201ENST00000579952 141 ntBASIC4.09□□□□□ -1.75
DTX3Q8N9I9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 MIR548AC-201ENST00000585049 88 ntBASIC4.09□□□□□ -1.75
DTX3Q8N9I9 AC092447.9-201ENST00000603395 144 ntBASIC4.09□□□□□ -1.75
DTX3Q8N9I9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 RNU6-85P-201ENST00000605989 107 ntBASIC4.09□□□□□ -1.75
DTX3Q8N9I9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.09□□□□□ -1.75
DTX3Q8N9I9 ZNF285B-201ENST00000561698 1767 ntBASIC4.09□□□□□ -1.76
DTX3Q8N9I9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
DTX3Q8N9I9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 U3.2-201ENST00000362981 210 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 Y_RNA.153-201ENST00000363615 91 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 RNU6-1329P-201ENST00000365664 107 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 Y_RNA.389-201ENST00000383924 113 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 SNORA36C-201ENST00000384289 132 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 SNORA41-201ENST00000384675 132 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 MIR578-201ENST00000384828 96 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 RNU6-55P-201ENST00000411092 107 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AC243428.1-201ENST00000421099 264 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 HMGB1P9-201ENST00000429856 646 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AL360271.2-201ENST00000447710 161 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AC108145.1-201ENST00000503770 153 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AC110794.1-201ENST00000505816 425 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AC017037.1-201ENST00000508460 471 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 MTND3P25-201ENST00000509243 135 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 RNU6-635P-201ENST00000516651 102 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 RNU4-60P-201ENST00000517239 135 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AC109446.1-201ENST00000566172 220 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 HNRNPCP4-201ENST00000571636 900 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 MTND6P33-201ENST00000571794 183 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AC104695.3-201ENST00000604052 296 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AC010680.4-201ENST00000605334 543 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 PRR13P7-201ENST00000605538 430 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AL591926.8-201ENST00000616876 211 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AL031601.2-202ENST00000622650 282 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 AL391684.1-202ENST00000641293 1636 ntBASIC4.08□□□□□ -1.76
DTX3Q8N9I9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
DTX3Q8N9I9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 LINC02471-203ENST00000641941 4752 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
DTX3Q8N9I9 AC009812.4-201ENST00000569134 1805 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DTX3Q8N9I9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DTX3Q8N9I9 Y_RNA.151-201ENST00000363566 112 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 RNA5SP455-201ENST00000365190 119 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
DTX3Q8N9I9 SET-203ENST00000372688 801 ntTSL 2 BASIC4.07□□□□□ -1.76
DTX3Q8N9I9 Y_RNA.534-201ENST00000384599 112 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 Y_RNA.574-201ENST00000384766 95 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 AC096664.2-201ENST00000411843 406 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 AC063979.1-201ENST00000415539 377 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.07□□□□□ -1.76
DTX3Q8N9I9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.07□□□□□ -1.76
DTX3Q8N9I9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.07□□□□□ -1.76
DTX3Q8N9I9 CBX3P6-201ENST00000430257 527 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 RPS17P8-201ENST00000434525 335 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 HMGB1P12-201ENST00000438594 598 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 RPS29P22-201ENST00000472363 168 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 AC092451.1-201ENST00000480211 153 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 RPS15AP34-201ENST00000487776 387 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 AC018437.1-201ENST00000492214 406 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 MRPS35P2-201ENST00000508242 191 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.07□□□□□ -1.76
DTX3Q8N9I9 RNA5SP43-201ENST00000516559 110 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 Y_RNA.721-201ENST00000517207 102 ntBASIC4.07□□□□□ -1.76
DTX3Q8N9I9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.07□□□□□ -1.76
DTX3Q8N9I9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms