Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR34A-201ENST00000385130 110 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 RNU6-837P-201ENST00000391056 108 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 AL357139.1-201ENST00000407792 426 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 AL390729.2-201ENST00000416137 156 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 BMS1P17-202ENST00000416720 316 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 POLR2KP2-201ENST00000438155 177 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 FABP5P15-201ENST00000453566 214 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 RPL23AP24-201ENST00000458203 385 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 AC021006.3-201ENST00000530771 192 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 AC008521.2-201ENST00000591021 259 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 RMST_6.1-201ENST00000611980 203 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 U4.7-201ENST00000638126 106 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AC116096.1-201ENST00000566804 2314 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 RNU6-626P-201ENST00000363354 107 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 RNA5SP213-201ENST00000391031 106 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AL353705.4-201ENST00000449661 238 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 RPS5P7-201ENST00000456664 608 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AC023424.1-201ENST00000496058 459 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AC091912.1-201ENST00000511351 248 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AC004980.4-201ENST00000513375 203 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 RNU6-1114P-201ENST00000516022 107 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 SCARNA21.2-201ENST00000516600 166 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 RNU6-567P-201ENST00000516746 107 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 MIR5692C2-201ENST00000577959 77 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 RN7SL787P-201ENST00000613000 284 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 MIR6729-201ENST00000618194 65 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AC127024.6-201ENST00000621598 424 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AC132068.1-201ENST00000623805 459 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 CU639417.4-201ENST00000623928 207 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 OR4G2P-202ENST00000641004 1759 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 AC009541.1-201ENST00000438279 2662 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 RAD17P1-201ENST00000418130 2042 ntBASIC5.16□□□□□ -1.58
CCDC116Q8IYX3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.15□□□□□ -1.58
CCDC116Q8IYX3 RN7SKP145-201ENST00000363291 303 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 SNORD115-32-201ENST00000364079 82 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 RNU6-1175P-201ENST00000365200 107 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 RNU6-20P-201ENST00000384106 107 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 SNORD56.6-201ENST00000384569 71 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 RNU6-257P-201ENST00000410238 98 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 SDHDP6-201ENST00000414693 480 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 AC091390.3-201ENST00000426478 338 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 AC009237.7-201ENST00000447357 229 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 SNORD116-25-201ENST00000516517 92 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 NDUFB4P11-201ENST00000560510 395 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 MIR3614-201ENST00000581261 86 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 MIR4443-201ENST00000585052 53 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 AC012616.1-201ENST00000600294 197 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.15□□□□□ -1.59
CCDC116Q8IYX3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms