Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FP236240.3-201ENST00000623061 327 ntBASIC3.24□□□□□ -1.89
SHFQ7M4L6 AC011155.2-201ENST00000623202 216 ntBASIC3.24□□□□□ -1.89
SHFQ7M4L6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.24□□□□□ -1.89
SHFQ7M4L6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.24□□□□□ -1.89
SHFQ7M4L6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.24□□□□□ -1.89
SHFQ7M4L6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.24□□□□□ -1.89
SHFQ7M4L6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SHFQ7M4L6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC004972.1-201ENST00000623934 2209 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHFQ7M4L6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHFQ7M4L6 SNORD115-7-201ENST00000365306 82 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 Y_RNA.576-201ENST00000384781 102 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AL139397.2-201ENST00000404529 772 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AL139247.1-201ENST00000422768 325 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC091390.3-201ENST00000426478 338 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 VN1R17P-201ENST00000472048 1090 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AL163973.1-201ENST00000484753 577 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC026979.1-201ENST00000492525 396 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHFQ7M4L6 PRDX4P1-201ENST00000507189 574 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 AL359273.1-201ENST00000510918 627 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 RNU2-58P-201ENST00000516403 183 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AP006245.1-201ENST00000522549 120 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 MIR5187-201ENST00000583479 76 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC006077.1-201ENST00000604746 343 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 AL365204.3-201ENST00000612448 685 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC010338.1-201ENST00000621823 717 ntBASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.23□□□□□ -1.89
SHFQ7M4L6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHFQ7M4L6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHFQ7M4L6 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHFQ7M4L6 AC068647.1-201ENST00000489539 2265 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHFQ7M4L6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.22□□□□□ -1.89
SHFQ7M4L6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHFQ7M4L6 RPL7P26-201ENST00000333817 754 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
SHFQ7M4L6 RNU6-877P-201ENST00000383868 107 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 RNY3P14-201ENST00000384309 102 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 AL354719.1-201ENST00000406535 843 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 RNU6-628P-201ENST00000410675 107 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 RNU6-1068P-201ENST00000410958 103 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 RNU2-71P-201ENST00000411395 189 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 AL513331.1-201ENST00000411908 397 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 RPL30P16-201ENST00000419341 429 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 RPL27AP8-201ENST00000424277 446 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.22□□□□□ -1.89
SHFQ7M4L6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.22□□□□□ -1.89
SHFQ7M4L6 AL118520.1-201ENST00000450770 291 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 RN7SL132P-201ENST00000478131 296 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHFQ7M4L6 SCARNA15.2-201ENST00000516409 127 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 RNA5SP503-201ENST00000517047 117 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.22□□□□□ -1.89
SHFQ7M4L6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.22□□□□□ -1.89
SHFQ7M4L6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHFQ7M4L6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHFQ7M4L6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.22□□□□□ -1.89
SHFQ7M4L6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.22□□□□□ -1.89
SHFQ7M4L6 RPL23AP84-201ENST00000571193 464 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 MTCO3P24-201ENST00000572729 782 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 MIR4703-201ENST00000577728 79 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 AC106900.2-201ENST00000604994 317 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 AP002826.1-201ENST00000608835 315 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 AL136295.6-201ENST00000610486 658 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 AC099778.2-201ENST00000610904 211 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 RMST_3.1-201ENST00000611651 109 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 AL020991.1-201ENST00000612314 373 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 AC090132.2-201ENST00000615881 347 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 AC022149.2-201ENST00000621061 203 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 AL354798.1-201ENST00000622505 329 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 MIR3662-201ENST00000637030 95 ntBASIC3.22□□□□□ -1.89
SHFQ7M4L6 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SHFQ7M4L6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SHFQ7M4L6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHFQ7M4L6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
SHFQ7M4L6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHFQ7M4L6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHFQ7M4L6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHFQ7M4L6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms