Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AL365204.3-201ENST00000612448 685 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC114781.5-201ENST00000615297 108 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC009233.1-201ENST00000616477 371 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AL357559.1-201ENST00000622228 274 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AC103710.2-202ENST00000641454 2853 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 PRO1804-201ENST00000623780 2050 ntBASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTCHD4Q6ZW05 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 MIR423-201ENST00000362201 94 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 RNU5A-1-201ENST00000362698 116 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 Y_RNA.378-201ENST00000365652 113 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 Y_RNA.509-201ENST00000384506 99 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 NDUFB4P5-201ENST00000415445 361 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 CALM2P2-201ENST00000428512 440 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 MRPL50P4-201ENST00000446432 475 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 MTCO3P9-201ENST00000506989 781 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 RNU4-49P-201ENST00000516080 140 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 SNRPGP16-201ENST00000533275 226 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 GLYCAM1-201ENST00000546596 285 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 SCOCP1-201ENST00000554676 349 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 BDH2P1-201ENST00000602288 736 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AC008745.1-201ENST00000604064 271 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AC021646.1-201ENST00000605469 484 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AC087045.1-201ENST00000605856 382 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AL360181.4-201ENST00000621752 134 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AF117829.1-206ENST00000621883 3802 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 LARP1BP1-201ENST00000506036 1359 ntBASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD4Q6ZW05 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 MIR383-201ENST00000362257 73 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-50P-201ENST00000362356 103 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 SNORA60-201ENST00000362396 134 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-288P-201ENST00000363690 104 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 DEFB109C-201ENST00000382575 264 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 DEFB109B-201ENST00000382656 264 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-190P-201ENST00000384154 102 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 HLFP1-201ENST00000402375 499 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AL122016.1-201ENST00000403365 367 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AL592114.1-201ENST00000403842 483 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 RN7SKP140-201ENST00000411196 284 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 RNA5SP111-201ENST00000411386 101 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 RPL37P18-201ENST00000411602 243 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 MTND3P8-201ENST00000412909 339 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC103851.1-201ENST00000506833 274 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 Y_RNA.675-201ENST00000516389 149 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-677P-201ENST00000516914 101 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AL355836.1-201ENST00000555951 870 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 MIR4277-201ENST00000578298 84 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 MIR4330-201ENST00000579077 105 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 MIR4742-201ENST00000581069 85 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC243960.4-201ENST00000600532 288 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AL356055.1-201ENST00000602528 446 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC092807.2-201ENST00000609367 243 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AL132765.2-201ENST00000610812 351 ntBASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCHD4Q6ZW05 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms