Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC127537.2-201ENST00000439258 465 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 RPL23AP33-201ENST00000442301 452 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 RPL22P13-201ENST00000493291 347 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 HIGD1AP13-201ENST00000509878 289 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 Y_RNA.670-201ENST00000516255 105 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 RN7SKP40-201ENST00000517211 242 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 COX6CP3-201ENST00000580869 223 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AC005255.1-201ENST00000593748 216 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AC009229.3-201ENST00000608056 282 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 MIR6128-201ENST00000615528 109 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AC010378.1-201ENST00000619270 362 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AC067931.1-201ENST00000624190 671 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AC138627.2-201ENST00000624202 601 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 AC005592.1-201ENST00000566527 1640 ntBASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.54□□□□□ -1.68
CNKSR3Q6P9H4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 Y_RNA.389-201ENST00000383924 113 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 MIR450B-201ENST00000401182 78 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AL391417.1-201ENST00000404100 426 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 NDUFS5P1-201ENST00000405668 289 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 MIR1911-201ENST00000410783 80 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 RPS12P23-201ENST00000419579 400 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 RPL7P46-201ENST00000425129 740 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 CKS1BP5-201ENST00000434172 273 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AL590399.6-201ENST00000446396 307 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 PPIAP3-201ENST00000450588 505 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-470P-201ENST00000515954 104 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-120P-201ENST00000516077 103 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-189P-201ENST00000516120 101 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 Y_RNA.680-201ENST00000516441 93 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AC022882.1-201ENST00000532142 501 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 MIR3936-201ENST00000584304 110 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 SNORA51-201ENST00000606420 132 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 U73479.1-201ENST00000618062 168 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AL354798.1-201ENST00000622505 329 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AL136313.1-201ENST00000624804 202 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 AC116667.1-201ENST00000604855 2072 ntBASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNKSR3Q6P9H4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.69
CNKSR3Q6P9H4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 AC074029.4-201ENST00000624796 1859 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 SNORA63.1-201ENST00000362493 131 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 RNU1-35P-201ENST00000362782 153 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-188P-201ENST00000364207 107 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-450P-201ENST00000364654 107 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 Y_RNA.333-201ENST00000365274 102 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 RNU1-44P-201ENST00000384453 163 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 MIR1179-201ENST00000408703 91 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 HSPE1P12-201ENST00000412576 301 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 YME1L1P1-201ENST00000429435 297 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 MTCO3P45-201ENST00000443036 613 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 AL162388.1-201ENST00000450912 352 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 AC104164.2-201ENST00000496953 495 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 AC116655.1-201ENST00000508324 901 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 AC116337.1-201ENST00000509680 687 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 MTCO3P44-201ENST00000510977 541 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms