Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RNU6-701P-201ENST00000384059 107 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 RNU6-1181P-201ENST00000384191 106 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 TXNP7-201ENST00000406296 293 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 OR9R1P-201ENST00000412200 877 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 EEF1A1P40-201ENST00000412883 573 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 AC114491.1-201ENST00000416095 246 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 MRPL50P2-201ENST00000416821 482 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 DUTP6-201ENST00000425573 462 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 AP000907.1-201ENST00000428428 510 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4□□□□□ -1.77
SLC44A4Q53GD3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 snoU13.4-201ENST00000458916 104 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 AC233702.1-201ENST00000482905 502 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 VN1R104P-201ENST00000505115 1009 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 SCARNA15.1-201ENST00000516384 125 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 RNU6-1231P-201ENST00000517185 103 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 AC100870.1-201ENST00000522035 505 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4□□□□□ -1.77
SLC44A4Q53GD3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 DPPA3P3-201ENST00000603842 430 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 AC005034.5-201ENST00000604219 466 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 AC064836.2-201ENST00000609491 462 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 AL589994.2-201ENST00000621124 579 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC44A4Q53GD3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC44A4Q53GD3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC44A4Q53GD3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 RNU6-451P-201ENST00000362921 107 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 SNORA62.1-201ENST00000364287 154 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 RNU6-1322P-201ENST00000364309 107 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 SNORA7.2-201ENST00000364446 145 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 RNVU1-14-201ENST00000384770 164 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AL356057.2-201ENST00000403318 432 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 RNU2-39P-201ENST00000410604 198 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AC007677.1-201ENST00000445757 515 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 CYCSP35-201ENST00000451978 304 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 SNRPGP5-201ENST00000456003 220 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 RPS29P15-201ENST00000458329 171 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 RN7SL585P-201ENST00000470538 280 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AC006517.1-201ENST00000480485 328 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 RN7SL271P-201ENST00000487601 295 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 SNORD27.1-201ENST00000516319 72 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 Y_RNA.701-201ENST00000516812 110 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 RNU6-1092P-201ENST00000516955 87 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 MIR5187-201ENST00000583479 76 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AC078795.3-201ENST00000602913 472 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AC009233.1-201ENST00000616477 371 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AC006504.8-201ENST00000621046 635 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 PRO1804-201ENST00000623780 2050 ntBASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC44A4Q53GD3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 RNU6-173P-201ENST00000364215 104 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 SMIM11P1-201ENST00000369586 178 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 SNORA36C-201ENST00000384289 132 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 MIR218-2-201ENST00000385006 110 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 SNRPEP10-201ENST00000420249 274 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 RAC1P6-201ENST00000423911 575 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 RPL21P112-201ENST00000434403 463 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 CACYBPP2-201ENST00000453625 678 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 RPL23AP31-201ENST00000456160 467 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 SNORD97-201ENST00000459187 142 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 HMGN1P10-201ENST00000474557 553 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 RPS27AP1-201ENST00000475545 471 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms