Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC010486.1-201ENST00000511793 424 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.18□□□□□ -1.74
SF3B3Q15393 ARL2BPP2-201ENST00000550907 489 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.18□□□□□ -1.74
SF3B3Q15393 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.18□□□□□ -1.74
SF3B3Q15393 OR4T1P-201ENST00000554933 911 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.18□□□□□ -1.74
SF3B3Q15393 AC015917.1-201ENST00000579654 510 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 AC060771.1-201ENST00000582031 164 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 AC044792.1-201ENST00000593294 196 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.18□□□□□ -1.74
SF3B3Q15393 MIR486-1-201ENST00000612171 68 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 MTND1P37-201ENST00000636562 264 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 AC112487.2-201ENST00000637950 304 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SF3B3Q15393 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SF3B3Q15393 AC011460.1-201ENST00000636268 1834 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SF3B3Q15393 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SF3B3Q15393 AC073073.2-201ENST00000609827 2578 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 AC009902.3-201ENST00000606235 2172 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.17□□□□□ -1.74
SF3B3Q15393 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SF3B3Q15393 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SF3B3Q15393 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SF3B3Q15393 RNU4-73P-201ENST00000363164 141 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 Y_RNA.142-201ENST00000363491 102 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 RNA5SP322-201ENST00000363617 119 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 RNY1P12-201ENST00000364251 105 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 Y_RNA.548-201ENST00000384656 105 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.17□□□□□ -1.74
SF3B3Q15393 AC127526.1-201ENST00000417526 366 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.17□□□□□ -1.74
SF3B3Q15393 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.17□□□□□ -1.74
SF3B3Q15393 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.17□□□□□ -1.74
SF3B3Q15393 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.17□□□□□ -1.74
SF3B3Q15393 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.17□□□□□ -1.74
SF3B3Q15393 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.17□□□□□ -1.74
SF3B3Q15393 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.17□□□□□ -1.74
SF3B3Q15393 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.17□□□□□ -1.74
SF3B3Q15393 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.17□□□□□ -1.74
SF3B3Q15393 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.17□□□□□ -1.74
SF3B3Q15393 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.17□□□□□ -1.74
SF3B3Q15393 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.17□□□□□ -1.74
SF3B3Q15393 HMGB1P6-201ENST00000569046 646 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 AC018638.8-201ENST00000588755 281 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 AC068790.3-201ENST00000602988 553 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 Z84480.1-201ENST00000605131 311 ntBASIC4.17□□□□□ -1.74
SF3B3Q15393 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.17□□□□□ -1.74
SF3B3Q15393 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.17□□□□□ -1.74
SF3B3Q15393 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SF3B3Q15393 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SF3B3Q15393 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
SF3B3Q15393 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SF3B3Q15393 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SF3B3Q15393 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SF3B3Q15393 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.16□□□□□ -1.74
SF3B3Q15393 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SF3B3Q15393 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.16□□□□□ -1.74
SF3B3Q15393 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SF3B3Q15393 MTCO1P24-201ENST00000515438 1558 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 RNU6-845P-201ENST00000362578 103 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 Y_RNA.157-201ENST00000363638 102 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 Y_RNA.529-201ENST00000384586 119 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 RNU1-89P-201ENST00000384592 164 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 AL391417.1-201ENST00000404100 426 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 AL354719.1-201ENST00000406535 843 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 RNU2-9P-201ENST00000410194 145 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 RNU6-1068P-201ENST00000410958 103 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.16□□□□□ -1.74
SF3B3Q15393 AC063979.1-201ENST00000415539 377 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.16□□□□□ -1.74
SF3B3Q15393 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.16□□□□□ -1.74
SF3B3Q15393 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.16□□□□□ -1.74
SF3B3Q15393 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SF3B3Q15393 AL357552.1-201ENST00000445254 415 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.16□□□□□ -1.74
SF3B3Q15393 AC078785.3-201ENST00000476607 425 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.16□□□□□ -1.74
SF3B3Q15393 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.16□□□□□ -1.74
SF3B3Q15393 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.16□□□□□ -1.74
SF3B3Q15393 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.16□□□□□ -1.74
SF3B3Q15393 PCBP2P3-201ENST00000509726 843 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 AC021146.1-201ENST00000511202 716 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.16□□□□□ -1.74
SF3B3Q15393 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.16□□□□□ -1.74
SF3B3Q15393 RPS3AP23-202ENST00000574601 686 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.16□□□□□ -1.74
SF3B3Q15393 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.16□□□□□ -1.74
SF3B3Q15393 AC073657.2-201ENST00000605661 303 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 DISC2.1-201ENST00000612827 205 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 uc_338.12-201ENST00000616344 181 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 AC022149.2-201ENST00000621061 203 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SF3B3Q15393 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.16□□□□□ -1.74
SF3B3Q15393 AC006026.1-201ENST00000444025 1803 ntBASIC4.16□□□□□ -1.74
SF3B3Q15393 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SF3B3Q15393 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SF3B3Q15393 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SF3B3Q15393 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms