Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.44□□□□□ -2.02
SMARCB1Q12824 AC090615.1-201ENST00000577519 154 ntBASIC2.44□□□□□ -2.02
SMARCB1Q12824 AC103810.1-201ENST00000579873 453 ntBASIC2.44□□□□□ -2.02
SMARCB1Q12824 AL353997.4-201ENST00000586196 166 ntBASIC2.44□□□□□ -2.02
SMARCB1Q12824 AP001429.1-201ENST00000602568 530 ntBASIC2.44□□□□□ -2.02
SMARCB1Q12824 AC013444.2-201ENST00000603317 787 ntBASIC2.44□□□□□ -2.02
SMARCB1Q12824 AC112220.3-201ENST00000605502 502 ntBASIC2.44□□□□□ -2.02
SMARCB1Q12824 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.44□□□□□ -2.02
SMARCB1Q12824 AC087359.1-201ENST00000508335 1740 ntBASIC2.44□□□□□ -2.02
SMARCB1Q12824 DDX43P2-201ENST00000604753 1354 ntBASIC2.44□□□□□ -2.02
SMARCB1Q12824 ZNF876P-202ENST00000398732 1485 ntBASIC2.44□□□□□ -2.02
SMARCB1Q12824 AC012321.1-201ENST00000561622 1588 ntBASIC2.44□□□□□ -2.02
SMARCB1Q12824 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 AC010680.1-201ENST00000590024 3590 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 RNU6-173P-201ENST00000364215 104 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 RNU1-91P-201ENST00000364746 163 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 RNU6-1207P-201ENST00000384343 107 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 MIR524-201ENST00000385242 87 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 MTND1P32-201ENST00000433043 938 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 SNRPGP6-201ENST00000451124 220 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 USP9YP10-201ENST00000454868 628 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 RNA5SP471-201ENST00000516971 106 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 MRPS36P3-201ENST00000519284 130 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 AP000867.2-201ENST00000532468 320 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 MIR4648-201ENST00000580107 72 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 AC105224.1-201ENST00000587055 421 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 UBE2L4-201ENST00000587688 464 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 AC006213.4-201ENST00000616184 634 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 AL158801.5-201ENST00000623123 465 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 AC110079.1-202ENST00000635213 138 ntBASIC2.43□□□□□ -2.02
SMARCB1Q12824 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.43□□□□□ -2.02
SMARCB1Q12824 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SMARCB1Q12824 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 RNU6-433P-201ENST00000363216 104 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 RNU5E-8P-201ENST00000363502 116 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 RNU6-744P-201ENST00000365557 107 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 RNU6-1316P-201ENST00000384242 108 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMARCB1Q12824 AL008987.1-201ENST00000415528 237 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 AL445669.1-201ENST00000426743 755 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 RSU1P2-202ENST00000437884 485 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 FAM103A2P-201ENST00000444122 354 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 MTCO1P27-201ENST00000448269 226 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 AL513124.1-201ENST00000450410 614 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC010099.1-201ENST00000455434 375 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 RPL31P60-201ENST00000478450 367 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 RPS15AP34-201ENST00000487776 387 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC022483.1-201ENST00000514020 567 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 CASP1P1-201ENST00000526345 212 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SMARCB1Q12824 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 PRELID2P1-201ENST00000552837 301 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 AP000254.1-201ENST00000609934 520 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC097478.2-201ENST00000610572 514 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC090132.2-201ENST00000615881 347 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC079597.1-201ENST00000624306 508 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 AC006927.4-201ENST00000639187 543 ntBASIC2.42□□□□□ -2.02
SMARCB1Q12824 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SMARCB1Q12824 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMARCB1Q12824 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SMARCB1Q12824 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SMARCB1Q12824 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SMARCB1Q12824 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SMARCB1Q12824 MIR21-201ENST00000362134 72 ntBASIC2.41□□□□□ -2.02
SMARCB1Q12824 SNORD113-6-201ENST00000363345 75 ntBASIC2.41□□□□□ -2.02
SMARCB1Q12824 SNORA4.1-201ENST00000364263 144 ntBASIC2.41□□□□□ -2.02
SMARCB1Q12824 U8.8-201ENST00000365399 135 ntBASIC2.41□□□□□ -2.02
SMARCB1Q12824 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SMARCB1Q12824 RNU6-76P-201ENST00000384060 104 ntBASIC2.41□□□□□ -2.02
SMARCB1Q12824 AL591416.1-201ENST00000404015 867 ntBASIC2.41□□□□□ -2.02
SMARCB1Q12824 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.41□□□□□ -2.02
SMARCB1Q12824 PPP1R11P2-201ENST00000423543 382 ntBASIC2.41□□□□□ -2.02
SMARCB1Q12824 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.41□□□□□ -2.02
SMARCB1Q12824 RPL7P37-201ENST00000425095 738 ntBASIC2.41□□□□□ -2.02
SMARCB1Q12824 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms