Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSRP1Q08945 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSRP1Q08945 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.57□□□□□ -1.68
SSRP1Q08945 IPO8P1-201ENST00000455509 3109 ntBASIC4.57□□□□□ -1.68
SSRP1Q08945 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SSRP1Q08945 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
SSRP1Q08945 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.57□□□□□ -1.68
SSRP1Q08945 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSRP1Q08945 UBE3AP2-201ENST00000429033 2259 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.56□□□□□ -1.68
SSRP1Q08945 SPRR2C-201ENST00000290702 219 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 Y_RNA.184-201ENST00000363884 108 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 SNORA51.2-201ENST00000364595 132 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 RNA5SP189-201ENST00000364920 115 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 RNU6-715P-201ENST00000365204 103 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSRP1Q08945 RNU6-393P-201ENST00000384475 107 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 AL139039.1-201ENST00000401900 692 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 AL121834.1-202ENST00000404494 277 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.56□□□□□ -1.68
SSRP1Q08945 OR4C10P-201ENST00000434991 931 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 AF228730.2-201ENST00000438784 848 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 HMGB1P18-201ENST00000438801 619 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 AL162151.2-201ENST00000448875 158 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 RPL37P6-201ENST00000460682 294 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 RPL31P13-201ENST00000484151 370 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 HIGD1AP13-201ENST00000509878 289 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.56□□□□□ -1.68
SSRP1Q08945 SNORA19.2-201ENST00000516013 114 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 Y_RNA.691-201ENST00000516611 103 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.56□□□□□ -1.68
SSRP1Q08945 AP001804.3-201ENST00000525146 880 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 AP000763.2-201ENST00000540641 163 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.56□□□□□ -1.68
SSRP1Q08945 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.56□□□□□ -1.68
SSRP1Q08945 MIR15A-201ENST00000607334 83 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 Z82243.1-201ENST00000609432 473 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 U2.17-201ENST00000611454 95 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 AC103705.1-201ENST00000619013 241 ntBASIC4.56□□□□□ -1.68
SSRP1Q08945 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.56□□□□□ -1.68
SSRP1Q08945 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SSRP1Q08945 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.56□□□□□ -1.68
SSRP1Q08945 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSRP1Q08945 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSRP1Q08945 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSRP1Q08945 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSRP1Q08945 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSRP1Q08945 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.55□□□□□ -1.68
SSRP1Q08945 HSPA8P4-201ENST00000511877 1920 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 MIR372-201ENST00000362225 67 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 SNORD113-7-201ENST00000363762 77 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSRP1Q08945 Y_RNA.399-201ENST00000383955 105 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 RNU6-1013P-201ENST00000384180 107 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 RNA5SP219-201ENST00000390940 113 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 SNORA16.2-201ENST00000390991 127 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 EIF4E2P1-201ENST00000393781 255 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 AL590704.1-201ENST00000402856 794 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 AL139397.2-201ENST00000404529 772 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 RN7SKP177-201ENST00000410567 355 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 BX682237.1-201ENST00000415016 335 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.55□□□□□ -1.68
SSRP1Q08945 RPL27AP8-201ENST00000424277 446 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.55□□□□□ -1.68
SSRP1Q08945 MTND1P14-201ENST00000427400 950 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 AL356867.1-201ENST00000429623 299 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 AL117339.2-201ENST00000430475 180 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.55□□□□□ -1.68
SSRP1Q08945 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.55□□□□□ -1.68
SSRP1Q08945 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.55□□□□□ -1.68
SSRP1Q08945 PPIAP15-201ENST00000479662 484 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.55□□□□□ -1.68
SSRP1Q08945 RNU6-864P-201ENST00000516256 108 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 RNU6-914P-201ENST00000516749 109 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 RANP9-201ENST00000519957 271 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 AC087369.1-201ENST00000520775 996 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSRP1Q08945 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.55□□□□□ -1.68
SSRP1Q08945 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.55□□□□□ -1.68
SSRP1Q08945 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.55□□□□□ -1.68
SSRP1Q08945 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.55□□□□□ -1.68
SSRP1Q08945 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
SSRP1Q08945 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.55□□□□□ -1.68
SSRP1Q08945 AC103710.3-201ENST00000608157 948 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.55□□□□□ -1.68
SSRP1Q08945 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.55□□□□□ -1.68
SSRP1Q08945 MIR1302-1-201ENST00000637932 143 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.55□□□□□ -1.68
SSRP1Q08945 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSRP1Q08945 AC018529.3-201ENST00000624212 2254 ntBASIC4.55□□□□□ -1.68
SSRP1Q08945 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSRP1Q08945 AC010733.2-201ENST00000589496 5702 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSRP1Q08945 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSRP1Q08945 RNA5SP479-201ENST00000364858 117 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 RNA5SP167-201ENST00000365461 116 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 RNU6-434P-201ENST00000384376 107 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 MIR708-201ENST00000390708 88 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms