Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC005951.2-201ENST00000576282 495 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AC005951.1-201ENST00000576706 485 ntBASIC2.52□□□□□ -2.01
LIM2P55344 MIR4635-201ENST00000583759 79 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AC239868.4-201ENST00000608318 671 ntBASIC2.52□□□□□ -2.01
LIM2P55344 OR10AB1P-201ENST00000609613 938 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AL355472.4-201ENST00000610233 626 ntBASIC2.52□□□□□ -2.01
LIM2P55344 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.52□□□□□ -2.01
LIM2P55344 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LIM2P55344 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.52□□□□□ -2.01
LIM2P55344 MTND1P37-201ENST00000636562 264 ntBASIC2.52□□□□□ -2.01
LIM2P55344 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.51□□□□□ -2.01
LIM2P55344 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.51□□□□□ -2.01
LIM2P55344 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
LIM2P55344 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LIM2P55344 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LIM2P55344 Y_RNA.46-201ENST00000362695 102 ntBASIC2.51□□□□□ -2.01
LIM2P55344 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
LIM2P55344 CD24P4-201ENST00000382840 243 ntBASIC2.51□□□□□ -2.01
LIM2P55344 RNU6-278P-201ENST00000390945 109 ntBASIC2.51□□□□□ -2.01
LIM2P55344 U3.26-201ENST00000391236 204 ntBASIC2.51□□□□□ -2.01
LIM2P55344 AL359634.1-202ENST00000404721 284 ntBASIC2.51□□□□□ -2.01
LIM2P55344 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.51□□□□□ -2.01
LIM2P55344 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.51□□□□□ -2.01
LIM2P55344 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.51□□□□□ -2.01
LIM2P55344 AL365203.2-201ENST00000423444 196 ntBASIC2.51□□□□□ -2.01
LIM2P55344 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.51□□□□□ -2.01
LIM2P55344 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.51□□□□□ -2.01
LIM2P55344 AL512286.1-201ENST00000439244 400 ntBASIC2.51□□□□□ -2.01
LIM2P55344 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.51□□□□□ -2.01
LIM2P55344 ST13P20-201ENST00000447996 1065 ntBASIC2.51□□□□□ -2.01
LIM2P55344 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.51□□□□□ -2.01
LIM2P55344 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.51□□□□□ -2.01
LIM2P55344 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.51□□□□□ -2.01
LIM2P55344 AC010099.1-201ENST00000455434 375 ntBASIC2.51□□□□□ -2.01
LIM2P55344 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.51□□□□□ -2.01
LIM2P55344 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.51□□□□□ -2.01
LIM2P55344 SNORD109B-201ENST00000458961 67 ntBASIC2.51□□□□□ -2.01
LIM2P55344 SNORD109A-201ENST00000459128 67 ntBASIC2.51□□□□□ -2.01
LIM2P55344 RPS27AP9-201ENST00000477681 438 ntBASIC2.51□□□□□ -2.01
LIM2P55344 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.51□□□□□ -2.01
LIM2P55344 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
LIM2P55344 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.51□□□□□ -2.01
LIM2P55344 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.51□□□□□ -2.01
LIM2P55344 AC008015.1-201ENST00000555505 465 ntBASIC2.51□□□□□ -2.01
LIM2P55344 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.51□□□□□ -2.01
LIM2P55344 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.51□□□□□ -2.01
LIM2P55344 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.51□□□□□ -2.01
LIM2P55344 AL356432.3-201ENST00000568952 465 ntBASIC2.51□□□□□ -2.01
LIM2P55344 AC002545.1-201ENST00000592511 181 ntBASIC2.51□□□□□ -2.01
LIM2P55344 MTCYBP22-201ENST00000603788 447 ntBASIC2.51□□□□□ -2.01
LIM2P55344 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.51□□□□□ -2.01
LIM2P55344 AL136363.1-201ENST00000605349 337 ntBASIC2.51□□□□□ -2.01
LIM2P55344 Z99289.3-201ENST00000605586 594 ntBASIC2.51□□□□□ -2.01
LIM2P55344 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.51□□□□□ -2.01
LIM2P55344 AL627309.6-201ENST00000606857 840 ntBASIC2.51□□□□□ -2.01
LIM2P55344 AC090970.3-201ENST00000612566 866 ntBASIC2.51□□□□□ -2.01
LIM2P55344 AC004696.1-201ENST00000614345 607 ntBASIC2.51□□□□□ -2.01
LIM2P55344 AC112204.3-201ENST00000623822 332 ntBASIC2.51□□□□□ -2.01
LIM2P55344 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LIM2P55344 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
LIM2P55344 AC099654.7-201ENST00000635788 2127 ntBASIC2.5□□□□□ -2.01
LIM2P55344 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.5□□□□□ -2.01
LIM2P55344 AP000568.1-201ENST00000282964 442 ntBASIC2.5□□□□□ -2.01
LIM2P55344 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LIM2P55344 RNU6-859P-201ENST00000362728 107 ntBASIC2.5□□□□□ -2.01
LIM2P55344 RNU1-39P-201ENST00000383897 165 ntBASIC2.5□□□□□ -2.01
LIM2P55344 RNU6-1027P-201ENST00000383998 107 ntBASIC2.5□□□□□ -2.01
LIM2P55344 RNU6-217P-201ENST00000384164 104 ntBASIC2.5□□□□□ -2.01
LIM2P55344 MIR592-201ENST00000384959 97 ntBASIC2.5□□□□□ -2.01
LIM2P55344 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LIM2P55344 AL122016.1-201ENST00000403365 367 ntBASIC2.5□□□□□ -2.01
LIM2P55344 AC078974.1-201ENST00000411597 223 ntBASIC2.5□□□□□ -2.01
LIM2P55344 VPS26BP1-201ENST00000417155 755 ntBASIC2.5□□□□□ -2.01
LIM2P55344 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.5□□□□□ -2.01
LIM2P55344 ZNF90P2-204ENST00000419323 1075 ntBASIC2.5□□□□□ -2.01
LIM2P55344 AL139281.1-201ENST00000422120 335 ntBASIC2.5□□□□□ -2.01
LIM2P55344 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.5□□□□□ -2.01
LIM2P55344 DPPA2P1-201ENST00000428060 556 ntBASIC2.5□□□□□ -2.01
LIM2P55344 RPS6P15-201ENST00000431996 751 ntBASIC2.5□□□□□ -2.01
LIM2P55344 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.5□□□□□ -2.01
LIM2P55344 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.5□□□□□ -2.01
LIM2P55344 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.5□□□□□ -2.01
LIM2P55344 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.5□□□□□ -2.01
LIM2P55344 AL031183.1-201ENST00000457667 207 ntBASIC2.5□□□□□ -2.01
LIM2P55344 AC112204.1-201ENST00000502591 103 ntBASIC2.5□□□□□ -2.01
LIM2P55344 MTCYBP35-201ENST00000503630 1137 ntBASIC2.5□□□□□ -2.01
LIM2P55344 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.5□□□□□ -2.01
LIM2P55344 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.5□□□□□ -2.01
LIM2P55344 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.5□□□□□ -2.01
LIM2P55344 RNA5SP356-201ENST00000515972 94 ntBASIC2.5□□□□□ -2.01
LIM2P55344 RN7SKP258-201ENST00000517151 304 ntBASIC2.5□□□□□ -2.01
LIM2P55344 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.5□□□□□ -2.01
LIM2P55344 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.5□□□□□ -2.01
LIM2P55344 NIFKP6-201ENST00000598115 845 ntBASIC2.5□□□□□ -2.01
LIM2P55344 KC877982.1-201ENST00000602313 470 ntBASIC2.5□□□□□ -2.01
LIM2P55344 AC245517.5-201ENST00000611529 162 ntBASIC2.5□□□□□ -2.01
LIM2P55344 AC004852.3-201ENST00000614131 326 ntBASIC2.5□□□□□ -2.01
LIM2P55344 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.5□□□□□ -2.01
LIM2P55344 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
LIM2P55344 PABPC1P9-201ENST00000426076 1612 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms