Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH6P55285 RPL21P132-201ENST00000331267 462 ntBASIC2.38□□□□□ -2.03
CDH6P55285 RNU6-884P-201ENST00000363889 107 ntBASIC2.38□□□□□ -2.03
CDH6P55285 RNU6-621P-201ENST00000364752 109 ntBASIC2.38□□□□□ -2.03
CDH6P55285 RNU6-413P-201ENST00000384115 107 ntBASIC2.38□□□□□ -2.03
CDH6P55285 RNU6-432P-201ENST00000384196 109 ntBASIC2.38□□□□□ -2.03
CDH6P55285 RNU6-1072P-201ENST00000384703 107 ntBASIC2.38□□□□□ -2.03
CDH6P55285 RNU6-443P-201ENST00000384780 107 ntBASIC2.38□□□□□ -2.03
CDH6P55285 CCNG1P1-201ENST00000406783 885 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH6P55285 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH6P55285 COX7BP2-201ENST00000437976 242 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AC007327.1-201ENST00000447461 264 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AC233279.1-201ENST00000455300 423 ntBASIC2.38□□□□□ -2.03
CDH6P55285 RPL12P25-201ENST00000455592 494 ntBASIC2.38□□□□□ -2.03
CDH6P55285 MRPL42P6-201ENST00000486397 371 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AL160314.1-201ENST00000490836 438 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AC105252.1-201ENST00000503089 286 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AC096571.1-202ENST00000506634 735 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH6P55285 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH6P55285 SNORA31.11-201ENST00000516528 139 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH6P55285 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH6P55285 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH6P55285 MIR5694-201ENST00000581190 76 ntBASIC2.38□□□□□ -2.03
CDH6P55285 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.38□□□□□ -2.03
CDH6P55285 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH6P55285 AL356280.1-201ENST00000603614 379 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.38□□□□□ -2.03
CDH6P55285 AC239868.4-201ENST00000608318 671 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AC104237.2-201ENST00000612456 443 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AL121895.2-201ENST00000619558 447 ntBASIC2.38□□□□□ -2.03
CDH6P55285 MIR6852-201ENST00000621699 66 ntBASIC2.38□□□□□ -2.03
CDH6P55285 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AP000720.1-201ENST00000625091 483 ntBASIC2.38□□□□□ -2.03
CDH6P55285 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH6P55285 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH6P55285 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CDH6P55285 Y_RNA.311-201ENST00000365068 96 ntBASIC2.37□□□□□ -2.03
CDH6P55285 RNU6-744P-201ENST00000365557 107 ntBASIC2.37□□□□□ -2.03
CDH6P55285 RNU6-1316P-201ENST00000384242 108 ntBASIC2.37□□□□□ -2.03
CDH6P55285 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH6P55285 USP9YP13-201ENST00000417797 480 ntBASIC2.37□□□□□ -2.03
CDH6P55285 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH6P55285 ATP5F1P1-201ENST00000433775 569 ntBASIC2.37□□□□□ -2.03
CDH6P55285 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH6P55285 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH6P55285 ZNF886P-201ENST00000450781 723 ntBASIC2.37□□□□□ -2.03
CDH6P55285 AL139109.1-201ENST00000455491 297 ntBASIC2.37□□□□□ -2.03
CDH6P55285 RNU7-26P-201ENST00000458980 63 ntBASIC2.37□□□□□ -2.03
CDH6P55285 MEMO1P3-201ENST00000459811 302 ntBASIC2.37□□□□□ -2.03
CDH6P55285 MTND1P16-201ENST00000465177 898 ntBASIC2.37□□□□□ -2.03
CDH6P55285 AC090096.1-201ENST00000489168 390 ntBASIC2.37□□□□□ -2.03
CDH6P55285 NDUFB4P2-201ENST00000509515 391 ntBASIC2.37□□□□□ -2.03
CDH6P55285 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH6P55285 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH6P55285 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH6P55285 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.37□□□□□ -2.03
CDH6P55285 AC090079.2-201ENST00000575289 768 ntBASIC2.37□□□□□ -2.03
CDH6P55285 DNAJC19P3-201ENST00000594491 331 ntBASIC2.37□□□□□ -2.03
CDH6P55285 AL357094.1-201ENST00000603845 844 ntBASIC2.37□□□□□ -2.03
CDH6P55285 AC090186.1-201ENST00000605991 572 ntBASIC2.37□□□□□ -2.03
CDH6P55285 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH6P55285 AC099063.3-201ENST00000642066 185 ntBASIC2.37□□□□□ -2.03
CDH6P55285 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH6P55285 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH6P55285 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDH6P55285 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDH6P55285 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDH6P55285 RNA5SP289-201ENST00000362332 137 ntBASIC2.36□□□□□ -2.03
CDH6P55285 SNORA38-201ENST00000363946 132 ntBASIC2.36□□□□□ -2.03
CDH6P55285 RNU6-750P-201ENST00000390946 107 ntBASIC2.36□□□□□ -2.03
CDH6P55285 AC023141.4-201ENST00000412031 328 ntBASIC2.36□□□□□ -2.03
CDH6P55285 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH6P55285 ZYG11AP1-201ENST00000430329 837 ntBASIC2.36□□□□□ -2.03
CDH6P55285 AC018634.1-201ENST00000437554 401 ntBASIC2.36□□□□□ -2.03
CDH6P55285 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH6P55285 HMGB1P36-201ENST00000487709 576 ntBASIC2.36□□□□□ -2.03
CDH6P55285 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.36□□□□□ -2.03
CDH6P55285 AC022447.1-201ENST00000515358 464 ntBASIC2.36□□□□□ -2.03
CDH6P55285 RNU5F-8P-201ENST00000515941 111 ntBASIC2.36□□□□□ -2.03
CDH6P55285 SCARNA17.1-201ENST00000516211 143 ntBASIC2.36□□□□□ -2.03
CDH6P55285 SCARNA17.2-201ENST00000516334 143 ntBASIC2.36□□□□□ -2.03
CDH6P55285 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.36□□□□□ -2.03
CDH6P55285 MTCYBP20-201ENST00000524239 1129 ntBASIC2.36□□□□□ -2.03
CDH6P55285 AP003122.3-201ENST00000526316 255 ntBASIC2.36□□□□□ -2.03
CDH6P55285 AP000889.2-201ENST00000532684 490 ntBASIC2.36□□□□□ -2.03
CDH6P55285 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH6P55285 AL359212.1-201ENST00000556608 614 ntBASIC2.36□□□□□ -2.03
CDH6P55285 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH6P55285 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH6P55285 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH6P55285 AF038458.1-201ENST00000588406 262 ntBASIC2.36□□□□□ -2.03
CDH6P55285 AC007938.3-201ENST00000604965 623 ntBASIC2.36□□□□□ -2.03
CDH6P55285 SCARNA17.4-201ENST00000614296 143 ntBASIC2.36□□□□□ -2.03
CDH6P55285 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CDH6P55285 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH6P55285 AC004808.1-201ENST00000627671 721 ntBASIC2.36□□□□□ -2.03
CDH6P55285 AC009902.3-201ENST00000606235 2172 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms