Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AP001836.1-201ENST00000604675 523 ntBASIC4.51□□□□□ -1.69
MRE11P49959 AC107294.1-201ENST00000609524 467 ntBASIC4.51□□□□□ -1.69
MRE11P49959 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.51□□□□□ -1.69
MRE11P49959 MIR6715A-201ENST00000615929 79 ntBASIC4.51□□□□□ -1.69
MRE11P49959 AC079684.1-201ENST00000621405 437 ntBASIC4.51□□□□□ -1.69
MRE11P49959 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.51□□□□□ -1.69
MRE11P49959 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
MRE11P49959 AL138713.1-201ENST00000624026 2130 ntBASIC4.51□□□□□ -1.69
MRE11P49959 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.51□□□□□ -1.69
MRE11P49959 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.5□□□□□ -1.69
MRE11P49959 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.5□□□□□ -1.69
MRE11P49959 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MRE11P49959 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MRE11P49959 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.5□□□□□ -1.69
MRE11P49959 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
MRE11P49959 RNU4-20P-201ENST00000365601 151 ntBASIC4.5□□□□□ -1.69
MRE11P49959 MIR558-201ENST00000384920 94 ntBASIC4.5□□□□□ -1.69
MRE11P49959 MIR514A2-201ENST00000385131 88 ntBASIC4.5□□□□□ -1.69
MRE11P49959 MIR514A3-201ENST00000385132 88 ntBASIC4.5□□□□□ -1.69
MRE11P49959 MIR454-201ENST00000390180 115 ntBASIC4.5□□□□□ -1.69
MRE11P49959 RNU2-15P-201ENST00000410692 191 ntBASIC4.5□□□□□ -1.69
MRE11P49959 RNU6-193P-201ENST00000410977 107 ntBASIC4.5□□□□□ -1.69
MRE11P49959 NDUFB4P5-201ENST00000415445 361 ntBASIC4.5□□□□□ -1.69
MRE11P49959 AL358472.1-201ENST00000431295 329 ntBASIC4.5□□□□□ -1.69
MRE11P49959 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.5□□□□□ -1.69
MRE11P49959 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MRE11P49959 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
MRE11P49959 HMGB1P18-201ENST00000438801 619 ntBASIC4.5□□□□□ -1.69
MRE11P49959 AC083863.1-201ENST00000438811 231 ntBASIC4.5□□□□□ -1.69
MRE11P49959 RAC1P7-201ENST00000445367 377 ntBASIC4.5□□□□□ -1.69
MRE11P49959 RPS17P13-201ENST00000448974 407 ntBASIC4.5□□□□□ -1.69
MRE11P49959 AL353691.1-201ENST00000451332 387 ntBASIC4.5□□□□□ -1.69
MRE11P49959 AL136097.1-201ENST00000456945 913 ntBASIC4.5□□□□□ -1.69
MRE11P49959 SNORD121B-201ENST00000458838 81 ntBASIC4.5□□□□□ -1.69
MRE11P49959 AL139099.1-201ENST00000497398 403 ntBASIC4.5□□□□□ -1.69
MRE11P49959 RNU4-29P-201ENST00000515943 174 ntBASIC4.5□□□□□ -1.69
MRE11P49959 RN7SKP209-201ENST00000516888 304 ntBASIC4.5□□□□□ -1.69
MRE11P49959 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.5□□□□□ -1.69
MRE11P49959 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.5□□□□□ -1.69
MRE11P49959 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.5□□□□□ -1.69
MRE11P49959 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.5□□□□□ -1.69
MRE11P49959 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.5□□□□□ -1.69
MRE11P49959 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.5□□□□□ -1.69
MRE11P49959 RNU6-89P-201ENST00000606519 100 ntBASIC4.5□□□□□ -1.69
MRE11P49959 AL603758.1-201ENST00000618654 241 ntBASIC4.5□□□□□ -1.69
MRE11P49959 AC004972.1-201ENST00000623934 2209 ntBASIC4.5□□□□□ -1.69
MRE11P49959 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
MRE11P49959 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MRE11P49959 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.49□□□□□ -1.69
MRE11P49959 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.49□□□□□ -1.69
MRE11P49959 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MRE11P49959 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
MRE11P49959 U3.11-201ENST00000364476 212 ntBASIC4.49□□□□□ -1.69
MRE11P49959 SNORD37.1-201ENST00000390968 65 ntBASIC4.49□□□□□ -1.69
MRE11P49959 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.49□□□□□ -1.69
MRE11P49959 SNORA57.3-201ENST00000411095 141 ntBASIC4.49□□□□□ -1.69
MRE11P49959 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.49□□□□□ -1.69
MRE11P49959 AL353729.1-201ENST00000425044 720 ntBASIC4.49□□□□□ -1.69
MRE11P49959 ERLEC1P1-201ENST00000433806 578 ntBASIC4.49□□□□□ -1.69
MRE11P49959 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.49□□□□□ -1.69
MRE11P49959 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.49□□□□□ -1.69
MRE11P49959 RPL23AP46-201ENST00000438548 490 ntBASIC4.49□□□□□ -1.69
MRE11P49959 RPL23AP52-201ENST00000439311 478 ntBASIC4.49□□□□□ -1.69
MRE11P49959 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.49□□□□□ -1.69
MRE11P49959 RPL29P29-201ENST00000448725 423 ntBASIC4.49□□□□□ -1.69
MRE11P49959 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.49□□□□□ -1.69
MRE11P49959 AC108059.3-201ENST00000456388 214 ntBASIC4.49□□□□□ -1.69
MRE11P49959 Y_RNA.632-201ENST00000459189 102 ntBASIC4.49□□□□□ -1.69
MRE11P49959 AC007547.1-201ENST00000462177 490 ntBASIC4.49□□□□□ -1.69
MRE11P49959 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.49□□□□□ -1.69
MRE11P49959 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.49□□□□□ -1.69
MRE11P49959 AP005597.4-201ENST00000526762 229 ntBASIC4.49□□□□□ -1.69
MRE11P49959 AC011979.2-201ENST00000527568 352 ntBASIC4.49□□□□□ -1.69
MRE11P49959 TRAV8-5-201ENST00000537369 341 ntBASIC4.49□□□□□ -1.69
MRE11P49959 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.49□□□□□ -1.69
MRE11P49959 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.49□□□□□ -1.69
MRE11P49959 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.49□□□□□ -1.69
MRE11P49959 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.49□□□□□ -1.69
MRE11P49959 COX6CP3-201ENST00000580869 223 ntBASIC4.49□□□□□ -1.69
MRE11P49959 AL606490.9-201ENST00000603331 271 ntBASIC4.49□□□□□ -1.69
MRE11P49959 AL162730.1-201ENST00000605734 292 ntBASIC4.49□□□□□ -1.69
MRE11P49959 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.49□□□□□ -1.69
MRE11P49959 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.49□□□□□ -1.69
MRE11P49959 AC104237.2-201ENST00000612456 443 ntBASIC4.49□□□□□ -1.69
MRE11P49959 AC130324.3-201ENST00000614165 542 ntBASIC4.49□□□□□ -1.69
MRE11P49959 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.49□□□□□ -1.69
MRE11P49959 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.49□□□□□ -1.69
MRE11P49959 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.49□□□□□ -1.69
MRE11P49959 AC090337.1-201ENST00000579651 2074 ntBASIC4.49□□□□□ -1.69
MRE11P49959 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MRE11P49959 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
MRE11P49959 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
MRE11P49959 RNA5SP167-201ENST00000365461 116 ntBASIC4.48□□□□□ -1.69
MRE11P49959 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
MRE11P49959 OR1AA1P-201ENST00000419597 916 ntBASIC4.48□□□□□ -1.69
MRE11P49959 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.48□□□□□ -1.69
MRE11P49959 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.48□□□□□ -1.69
MRE11P49959 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.48□□□□□ -1.69
MRE11P49959 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.48□□□□□ -1.69
MRE11P49959 MTATP6P16-201ENST00000434543 526 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms