Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
SCN4AP35499 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCN4AP35499 SNORD56.5-201ENST00000364281 72 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 RNU6-1181P-201ENST00000384191 106 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 RNU6-906P-201ENST00000384700 70 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AL592310.1-201ENST00000414330 671 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN4AP35499 TIMM9P2-201ENST00000419324 266 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 MRPS36P1-201ENST00000421291 307 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AC009237.2-201ENST00000421358 284 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SCN4AP35499 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.19□□□□□ -2.06
SCN4AP35499 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.19□□□□□ -2.06
SCN4AP35499 RPL23AP7-203ENST00000449021 469 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AC097493.1-201ENST00000463958 372 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 PABPC1P3-201ENST00000469174 459 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AC055855.1-201ENST00000489563 579 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SCN4AP35499 AC010625.1-201ENST00000511296 403 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN4AP35499 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.19□□□□□ -2.06
SCN4AP35499 AC087808.1-201ENST00000520501 361 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 HMGN1P28-201ENST00000521340 364 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN4AP35499 LSM6P2-201ENST00000552208 177 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN4AP35499 MTCO3P24-201ENST00000572729 782 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.19□□□□□ -2.06
SCN4AP35499 BNIP3P26-201ENST00000600827 554 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.19□□□□□ -2.06
SCN4AP35499 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SCN4AP35499 RNU6-839P-201ENST00000363347 108 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SCN4AP35499 SNORD51-201ENST00000384320 80 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 ANAPC10P1-201ENST00000395991 556 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN4AP35499 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN4AP35499 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SCN4AP35499 SEPT7P5-201ENST00000434048 306 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.19□□□□□ -2.06
SCN4AP35499 AL031659.1-201ENST00000447075 539 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN4AP35499 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN4AP35499 RN7SKP40-201ENST00000517211 242 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.19□□□□□ -2.06
SCN4AP35499 SLC2A13P1-201ENST00000531560 322 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.19□□□□□ -2.06
SCN4AP35499 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.19□□□□□ -2.06
SCN4AP35499 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.19□□□□□ -2.06
SCN4AP35499 MIR4637-201ENST00000582405 84 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN4AP35499 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.19□□□□□ -2.06
SCN4AP35499 AC024060.1-201ENST00000607052 494 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 AC012360.2-201ENST00000609349 391 ntBASIC2.19□□□□□ -2.06
SCN4AP35499 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN4AP35499 AC107982.1-201ENST00000507171 1300 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SCN4AP35499 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SCN4AP35499 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 MIR607-201ENST00000385241 96 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AL079342.2-201ENST00000403367 482 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 RNU4-65P-201ENST00000410473 140 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 RNU4-78P-201ENST00000410940 126 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 EIF1AXP1-201ENST00000419267 435 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 RPL21P66-201ENST00000426566 466 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN4AP35499 HMGN2P20-201ENST00000437531 273 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 VN1R10P-201ENST00000447106 875 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AL590664.1-201ENST00000448065 339 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AL589880.1-201ENST00000448271 287 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AC096571.1-202ENST00000506634 735 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN4AP35499 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.18□□□□□ -2.06
SCN4AP35499 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN4AP35499 HSPE1P3-201ENST00000559254 309 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AL132657.2-201ENST00000564417 358 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AC087481.2-201ENST00000565492 330 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 LARP7P2-201ENST00000575306 125 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 MIR4474-201ENST00000579189 78 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 MIR5089-201ENST00000580047 84 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN4AP35499 DUXAP11-201ENST00000603858 526 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AL121917.1-203ENST00000605534 577 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AC120349.2-201ENST00000625002 298 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN4AP35499 AC099654.8-201ENST00000637757 681 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 MTCO1P23-201ENST00000415223 1526 ntBASIC2.18□□□□□ -2.06
SCN4AP35499 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN4AP35499 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SCN4AP35499 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCN4AP35499 MIR144-201ENST00000384886 86 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 MIR620-201ENST00000385232 95 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 TXNP7-201ENST00000406296 293 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN4AP35499 TPMTP2-201ENST00000414372 726 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 MTND1P23-201ENST00000416931 372 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 AC092427.1-201ENST00000439177 601 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 MTND2P20-201ENST00000440805 661 ntBASIC2.17□□□□□ -2.06
SCN4AP35499 ZNF886P-201ENST00000450781 723 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms