Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC068135.2-201ENST00000569293 1028 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXD13P35453 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXD13P35453 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXD13P35453 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
HOXD13P35453 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
HOXD13P35453 GABRG2-229ENST00000641017 3628 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HOXD13P35453 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD13P35453 FTLP6-201ENST00000355274 422 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 RNU4-21P-201ENST00000362802 126 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 RNY3P10-201ENST00000384764 102 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 RNA5SP354-201ENST00000391247 136 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD13P35453 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXD13P35453 NPM1P11-201ENST00000417106 855 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD13P35453 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXD13P35453 ELOCP14-201ENST00000428070 331 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXD13P35453 AL714022.1-201ENST00000439897 151 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 ELOCP7-201ENST00000439968 331 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD13P35453 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXD13P35453 RNA5SP269-201ENST00000459032 137 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXD13P35453 NDUFB4P2-201ENST00000509515 391 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD13P35453 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXD13P35453 RNU7-51P-201ENST00000516560 62 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD13P35453 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HOXD13P35453 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXD13P35453 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD13P35453 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD13P35453 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD13P35453 MIR3944-201ENST00000581277 108 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 MIR548AB-201ENST00000584917 84 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 U73023.1-201ENST00000603134 700 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXD13P35453 AC107294.3-201ENST00000609211 526 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD13P35453 AC007998.5-201ENST00000622938 237 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 MIR3974-201ENST00000637126 96 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 API5P2-201ENST00000397055 1498 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 AC099654.7-201ENST00000635788 2127 ntBASIC3.32□□□□□ -1.88
HOXD13P35453 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD13P35453 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD13P35453 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD13P35453 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD13P35453 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD13P35453 MIR22-201ENST00000362190 85 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 RNU6-511P-201ENST00000363496 107 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 SNORA38.1-201ENST00000364172 131 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 RNY1P12-201ENST00000364251 105 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 DYNLT3P1-201ENST00000378574 347 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 MIR888-201ENST00000401186 77 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD13P35453 AC245054.2-201ENST00000415639 319 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 AC090960.1-201ENST00000421072 306 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 GPM6BP2-201ENST00000432046 144 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 OR2B8P-201ENST00000432841 938 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 SNRPEP9-201ENST00000436794 238 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 USP9YP15-201ENST00000442391 422 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 TAF9P1-201ENST00000445421 515 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 GPM6BP1-201ENST00000446387 144 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD13P35453 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXD13P35453 TAF9P2-201ENST00000454958 515 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 SNRPGP9-201ENST00000456025 225 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 RPS29P12-201ENST00000460178 152 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
HOXD13P35453 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD13P35453 AC010486.3-201ENST00000511602 785 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 SNORA31.3-201ENST00000516029 96 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 RNU6-143P-201ENST00000516942 93 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 RN7SKP57-201ENST00000517248 293 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
HOXD13P35453 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD13P35453 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD13P35453 AP006587.4-201ENST00000526053 529 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 AP003181.2-201ENST00000528941 181 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD13P35453 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXD13P35453 AC009977.1-201ENST00000586015 570 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 BNIP3P33-201ENST00000598912 569 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 AC104763.2-201ENST00000604179 382 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 AC103710.2-201ENST00000609912 942 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD13P35453 AC068880.5-201ENST00000624331 290 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD13P35453 AC092435.3-201ENST00000565538 3654 ntBASIC3.31□□□□□ -1.88
HOXD13P35453 UBE2L2-201ENST00000254302 429 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 HSPE1P11-201ENST00000339579 310 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 RNU6-817P-201ENST00000391083 104 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 AL021407.1-201ENST00000404531 386 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXD13P35453 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms