Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RNA5SP319-201ENST00000362768 119 ntBASIC5.08□□□□□ -1.6
GPC1P35052 Y_RNA.272-201ENST00000364696 102 ntBASIC5.08□□□□□ -1.6
GPC1P35052 RNU4-9P-201ENST00000364951 139 ntBASIC5.08□□□□□ -1.6
GPC1P35052 RNU6-1130P-201ENST00000365434 107 ntBASIC5.08□□□□□ -1.6
GPC1P35052 RNA5SP241-201ENST00000391326 114 ntBASIC5.08□□□□□ -1.6
GPC1P35052 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.08□□□□□ -1.6
GPC1P35052 MTCO1P39-201ENST00000426148 480 ntBASIC5.08□□□□□ -1.6
GPC1P35052 MTND6P12-201ENST00000428247 522 ntBASIC5.08□□□□□ -1.6
GPC1P35052 RPL19P16-201ENST00000433839 588 ntBASIC5.08□□□□□ -1.6
GPC1P35052 CYCSP6-201ENST00000434498 302 ntBASIC5.08□□□□□ -1.6
GPC1P35052 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC1P35052 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.08□□□□□ -1.6
GPC1P35052 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GPC1P35052 AL049874.1-201ENST00000489560 388 ntBASIC5.08□□□□□ -1.6
GPC1P35052 AC104164.2-201ENST00000496953 495 ntBASIC5.08□□□□□ -1.6
GPC1P35052 HMGB3P16-201ENST00000508037 287 ntBASIC5.08□□□□□ -1.6
GPC1P35052 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.08□□□□□ -1.6
GPC1P35052 RNU6-513P-201ENST00000516104 104 ntBASIC5.08□□□□□ -1.6
GPC1P35052 AC022790.1-201ENST00000522872 204 ntBASIC5.08□□□□□ -1.6
GPC1P35052 AC084851.1-201ENST00000529105 249 ntBASIC5.08□□□□□ -1.6
GPC1P35052 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC1P35052 AL161798.1-201ENST00000604630 131 ntBASIC5.08□□□□□ -1.6
GPC1P35052 AL365222.1-201ENST00000614661 98 ntBASIC5.08□□□□□ -1.6
GPC1P35052 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GPC1P35052 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC1P35052 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GPC1P35052 AP000542.2-201ENST00000623199 6179 ntBASIC5.08□□□□□ -1.6
GPC1P35052 AC233981.2-201ENST00000611524 1614 ntBASIC5.08□□□□□ -1.6
GPC1P35052 SCARNA15-201ENST00000607520 4325 ntBASIC5.08□□□□□ -1.6
GPC1P35052 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GPC1P35052 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
GPC1P35052 SMG1P6-201ENST00000532337 2930 ntBASIC5.07□□□□□ -1.6
GPC1P35052 ZNF826P-207ENST00000622273 1910 ntBASIC5.07□□□□□ -1.6
GPC1P35052 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
GPC1P35052 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
GPC1P35052 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
GPC1P35052 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
GPC1P35052 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.07□□□□□ -1.6
GPC1P35052 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.07□□□□□ -1.6
GPC1P35052 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GPC1P35052 RN7SKP224-201ENST00000364140 325 ntBASIC5.07□□□□□ -1.6
GPC1P35052 AL022722.2-201ENST00000402519 180 ntBASIC5.07□□□□□ -1.6
GPC1P35052 RN7SKP286-201ENST00000410894 299 ntBASIC5.07□□□□□ -1.6
GPC1P35052 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.07□□□□□ -1.6
GPC1P35052 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.07□□□□□ -1.6
GPC1P35052 MTATP6P4-201ENST00000427725 675 ntBASIC5.07□□□□□ -1.6
GPC1P35052 RPL7AP49-201ENST00000429522 581 ntBASIC5.07□□□□□ -1.6
GPC1P35052 CFL1P1-202ENST00000432948 411 ntBASIC5.07□□□□□ -1.6
GPC1P35052 AL591438.1-201ENST00000433508 581 ntBASIC5.07□□□□□ -1.6
GPC1P35052 RPS15AP7-201ENST00000439294 405 ntBASIC5.07□□□□□ -1.6
GPC1P35052 CEACAMP7-201ENST00000444105 496 ntBASIC5.07□□□□□ -1.6
GPC1P35052 AL359073.1-201ENST00000448036 403 ntBASIC5.07□□□□□ -1.6
GPC1P35052 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.07□□□□□ -1.6
GPC1P35052 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.07□□□□□ -1.6
GPC1P35052 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.07□□□□□ -1.6
GPC1P35052 AC091959.1-201ENST00000495857 238 ntBASIC5.07□□□□□ -1.6
GPC1P35052 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.07□□□□□ -1.6
GPC1P35052 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.07□□□□□ -1.6
GPC1P35052 IGKV3D-34-201ENST00000522638 302 ntBASIC5.07□□□□□ -1.6
GPC1P35052 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GPC1P35052 MIR4716-201ENST00000579628 84 ntBASIC5.07□□□□□ -1.6
GPC1P35052 MIR4308-201ENST00000580634 81 ntBASIC5.07□□□□□ -1.6
GPC1P35052 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.07□□□□□ -1.6
GPC1P35052 RN7SL787P-201ENST00000613000 284 ntBASIC5.07□□□□□ -1.6
GPC1P35052 AC084757.4-201ENST00000616350 526 ntBASIC5.07□□□□□ -1.6
GPC1P35052 AL691477.1-201ENST00000624398 162 ntBASIC5.07□□□□□ -1.6
GPC1P35052 SMG1P4-204ENST00000523028 4131 ntBASIC5.07□□□□□ -1.6
GPC1P35052 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
GPC1P35052 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
GPC1P35052 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GPC1P35052 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GPC1P35052 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GPC1P35052 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GPC1P35052 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
GPC1P35052 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
GPC1P35052 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.07□□□□□ -1.6
GPC1P35052 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GPC1P35052 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
GPC1P35052 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.06□□□□□ -1.6
GPC1P35052 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GPC1P35052 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
GPC1P35052 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
GPC1P35052 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
GPC1P35052 OR1L6-202ENST00000373684 1044 ntBASIC5.06□□□□□ -1.6
GPC1P35052 RNU6-318P-201ENST00000384283 103 ntBASIC5.06□□□□□ -1.6
GPC1P35052 SNORA16A-201ENST00000384342 137 ntBASIC5.06□□□□□ -1.6
GPC1P35052 RNU6-1168P-201ENST00000390831 104 ntBASIC5.06□□□□□ -1.6
GPC1P35052 UBA52P6-201ENST00000399822 382 ntBASIC5.06□□□□□ -1.6
GPC1P35052 RNU5A-5P-201ENST00000411054 116 ntBASIC5.06□□□□□ -1.6
GPC1P35052 AC119751.6-201ENST00000416712 186 ntBASIC5.06□□□□□ -1.6
GPC1P35052 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.06□□□□□ -1.6
GPC1P35052 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.06□□□□□ -1.6
GPC1P35052 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.06□□□□□ -1.6
GPC1P35052 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.06□□□□□ -1.6
GPC1P35052 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.06□□□□□ -1.6
GPC1P35052 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.06□□□□□ -1.6
GPC1P35052 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
GPC1P35052 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.06□□□□□ -1.6
GPC1P35052 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.06□□□□□ -1.6
GPC1P35052 AC022968.1-201ENST00000567372 442 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms