Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC096577.2-201ENST00000611455 153 ntBASIC3.73□□□□□ -1.81
CIITAP33076 uc_338.1-201ENST00000612113 180 ntBASIC3.73□□□□□ -1.81
CIITAP33076 XIST_intron.1-201ENST00000619444 68 ntBASIC3.73□□□□□ -1.81
CIITAP33076 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.73□□□□□ -1.81
CIITAP33076 MIR1321-201ENST00000637766 79 ntBASIC3.73□□□□□ -1.81
CIITAP33076 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CIITAP33076 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.73□□□□□ -1.81
CIITAP33076 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.73□□□□□ -1.81
CIITAP33076 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.72□□□□□ -1.81
CIITAP33076 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
CIITAP33076 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CIITAP33076 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.72□□□□□ -1.81
CIITAP33076 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CIITAP33076 RNU6-867P-201ENST00000364956 107 ntBASIC3.72□□□□□ -1.81
CIITAP33076 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.72□□□□□ -1.81
CIITAP33076 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CIITAP33076 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.72□□□□□ -1.81
CIITAP33076 RNU1-39P-201ENST00000383897 165 ntBASIC3.72□□□□□ -1.81
CIITAP33076 Y_RNA.453-201ENST00000384223 109 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AC068050.1-201ENST00000394891 380 ntBASIC3.72□□□□□ -1.81
CIITAP33076 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AL357075.1-201ENST00000404107 726 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AC009237.5-201ENST00000414271 501 ntBASIC3.72□□□□□ -1.81
CIITAP33076 MTCO1P20-201ENST00000425366 358 ntBASIC3.72□□□□□ -1.81
CIITAP33076 ELOCP14-201ENST00000428070 331 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AC004866.2-201ENST00000438285 481 ntBASIC3.72□□□□□ -1.81
CIITAP33076 ELOCP7-201ENST00000439968 331 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.72□□□□□ -1.81
CIITAP33076 RPL23AP20-201ENST00000447965 421 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.72□□□□□ -1.81
CIITAP33076 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.72□□□□□ -1.81
CIITAP33076 AC110794.1-201ENST00000505816 425 ntBASIC3.72□□□□□ -1.81
CIITAP33076 PRDX4P1-201ENST00000507189 574 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.72□□□□□ -1.81
CIITAP33076 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.72□□□□□ -1.81
CIITAP33076 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CIITAP33076 MTCO3P24-201ENST00000572729 782 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.72□□□□□ -1.81
CIITAP33076 AP001429.1-201ENST00000602568 530 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AC025449.1-201ENST00000603896 529 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AL355810.1-201ENST00000614629 552 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AC002553.4-201ENST00000616896 331 ntBASIC3.72□□□□□ -1.81
CIITAP33076 AC139792.3-201ENST00000623525 224 ntBASIC3.72□□□□□ -1.81
CIITAP33076 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.72□□□□□ -1.81
CIITAP33076 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CIITAP33076 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CIITAP33076 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CIITAP33076 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.72□□□□□ -1.81
CIITAP33076 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CIITAP33076 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
CIITAP33076 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.71□□□□□ -1.81
CIITAP33076 AL136164.4-201ENST00000625013 2135 ntBASIC3.71□□□□□ -1.81
CIITAP33076 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
CIITAP33076 AC118273.1-201ENST00000525324 3006 ntBASIC3.71□□□□□ -1.81
CIITAP33076 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.71□□□□□ -1.82
CIITAP33076 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.71□□□□□ -1.82
CIITAP33076 OR1S2-201ENST00000302592 978 ntBASIC3.71□□□□□ -1.82
CIITAP33076 RNU6-1155P-201ENST00000363554 107 ntBASIC3.71□□□□□ -1.82
CIITAP33076 RNU6-1085P-201ENST00000363576 107 ntBASIC3.71□□□□□ -1.82
CIITAP33076 RNU5A-8P-201ENST00000364102 114 ntBASIC3.71□□□□□ -1.82
CIITAP33076 RNU6-534P-201ENST00000364877 106 ntBASIC3.71□□□□□ -1.82
CIITAP33076 RNY3P13-201ENST00000365542 102 ntBASIC3.71□□□□□ -1.82
CIITAP33076 MIR184-201ENST00000384962 84 ntBASIC3.71□□□□□ -1.82
CIITAP33076 RPS4XP8-201ENST00000402039 771 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AC063979.1-201ENST00000415539 377 ntBASIC3.71□□□□□ -1.82
CIITAP33076 DPPA2P1-201ENST00000428060 556 ntBASIC3.71□□□□□ -1.82
CIITAP33076 OR4K11P-201ENST00000431829 904 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.71□□□□□ -1.82
CIITAP33076 RPL23AP30-201ENST00000432419 501 ntBASIC3.71□□□□□ -1.82
CIITAP33076 NEK4P1-201ENST00000433383 879 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AL353705.1-201ENST00000433468 480 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.71□□□□□ -1.82
CIITAP33076 RPL23AP31-201ENST00000456160 467 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AC023194.1-201ENST00000493084 308 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.71□□□□□ -1.82
CIITAP33076 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.71□□□□□ -1.82
CIITAP33076 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.71□□□□□ -1.82
CIITAP33076 SCARNA24.1-201ENST00000516465 137 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AC104383.1-201ENST00000530297 370 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.71□□□□□ -1.82
CIITAP33076 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.71□□□□□ -1.82
CIITAP33076 AL133271.1-201ENST00000538229 291 ntBASIC3.71□□□□□ -1.82
CIITAP33076 CR383656.7-201ENST00000548164 174 ntBASIC3.71□□□□□ -1.82
CIITAP33076 HIGD1AP1-201ENST00000550979 275 ntBASIC3.71□□□□□ -1.82
CIITAP33076 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.71□□□□□ -1.82
CIITAP33076 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.71□□□□□ -1.82
CIITAP33076 AL512360.1-201ENST00000555346 234 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.71□□□□□ -1.82
CIITAP33076 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.71□□□□□ -1.82
CIITAP33076 AC025678.1-201ENST00000567861 338 ntBASIC3.71□□□□□ -1.82
CIITAP33076 MIR548S-201ENST00000581352 82 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AC006254.3-201ENST00000603353 884 ntBASIC3.71□□□□□ -1.82
CIITAP33076 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AC007363.1-201ENST00000604736 620 ntBASIC3.71□□□□□ -1.82
CIITAP33076 TUG1_1.1-201ENST00000610654 145 ntBASIC3.71□□□□□ -1.82
CIITAP33076 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CIITAP33076 DUXAP9-208ENST00000622815 614 ntBASIC3.71□□□□□ -1.82
CIITAP33076 AC009161.2-201ENST00000624626 138 ntBASIC3.71□□□□□ -1.82
CIITAP33076 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.71□□□□□ -1.82
CIITAP33076 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms